RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CISD3P0C7P0 127 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 RHOQP17081 205 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 ATP11AP98196 1134 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 TNK2Q07912 1038 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 AUHQ13825 339 aaKnown RBP13.71□□□□□ -0.21
USP44-202ENST00000393091 DMC1Q14565 340 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 PHLDB2Q86SQ0 1253 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
USP44-202ENST00000393091 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 KCNV2Q8TDN2 545 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 ZNF830Q96NB3 372 aaPredicted RBP13.71□□□□□ -0.21
USP44-202ENST00000393091 ALS2CR12Q96Q35 445 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
USP44-202ENST00000393091 KLC2Q9H0B6 622 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
USP44-202ENST00000393091 PALMO75781 387 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 RARAP10276 462 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 ATXN1P54253 815 aaKnown RBP13.71□□□□□ -0.22
USP44-202ENST00000393091 PRKCQQ04759 706 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 GAD2Q05329 585 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 NME3Q13232 169 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 PREPLQ4J6C6 727 aaPredicted RBP13.71□□□□□ -0.22
USP44-202ENST00000393091 DENND1CQ8IV53 801 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 FIBINQ8TAL6 211 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 ADAM32Q8TC27 787 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 SMG9Q9H0W8 520 aaKnown RBP13.71□□□□□ -0.22
USP44-202ENST00000393091 ECT2Q9H8V3 914 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.22
USP44-202ENST00000393091 E9PAM4 449 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 MOCS3O95396 460 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 ZNF33AQ06730 810 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 RUNX3Q13761 415 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 MESDQ14696 234 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 DHCR24Q15392 516 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 SLC9A4Q6AI14 798 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 RALGPS2Q86X27 583 aaPredicted RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 P2RY11Q96G91 374 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 OSBPL6Q9BZF3 934 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 TRDMT1O14717 391 aaKnown RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 DCLK1O15075 740 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 CLDN11O75508 207 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 TCF4P15884 667 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 KDELR1P24390 212 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 DPYSL3Q14195 570 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 PAFAH1B3Q15102 231 aaKnown RBP13.7□□□□□ -0.22
USP44-202ENST00000393091 FBXL22Q6P050 247 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 FAM131BQ86XD5 332 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 UMODL1-AS1Q8N2C9 162 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 KDM1BQ8NB78 822 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 OR12D3Q9UGF7 316 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
USP44-202ENST00000393091 IFNAR2P48551 515 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 STARD6P59095 220 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 ITPRIPL2Q3MIP1 535 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 LZTR1Q8N653 840 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 TBC1D31Q96DN5 1066 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 RBM41Q96IZ5 413 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 KXD1Q9BQD3 176 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 SLITRK6Q9H5Y7 841 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP44-202ENST00000393091 OR51B4Q9Y5P0 310 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 A0A1B0GVM2 712 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 TCAF2A6NFQ2 919 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 F5H5T6 163 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 MSNP26038 577 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 NR1H3Q13133 447 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 E2F5Q15329 346 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 LRRC49Q8IUZ0 686 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 EPAS1Q99814 870 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 RPP25Q9BUL9 199 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 ZYG11BQ9C0D3 744 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 CARD9Q9H257 536 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 KMT2EQ8IZD2 1858 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 NDST2P52849 883 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 PAPD7Q5XG87 772 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 RASGEF1CQ8N431 466 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 ALG14Q96F25 216 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
USP44-202ENST00000393091 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 TCF20Q9UGU0 1960 aaKnown RBP13.69□□□□□ -0.22
USP44-202ENST00000393091 MYO9BQ13459 2157 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 ADH5P11766 374 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 CDKN2BP42772 138 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 TXNRD3NBQ6F5E7 133 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 EP400NLQ6ZTU2 488 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 MAP7D3Q8IWC1 876 aa13.68□□□□□ -0.22
USP44-202ENST00000393091 WFIKKN2Q8TEU8 576 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms