RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 SOX5P35711 763 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 RPS24P62847 133 aaKnown RBP21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 ARID5AQ03989 594 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 UBXN1Q04323 297 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 CCDC6Q16204 474 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 CAVIN1Q6NZI2 390 aaKnown RBP21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 ERICH1Q86X53 443 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 MFN1Q8IWA4 741 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 ATP6V0D2Q8N8Y2 350 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 LMLNQ96KR4 655 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 ERGIC2Q96RQ1 377 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 BPIFA3Q9BQP9 254 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 STIM2Q9P246 746 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 SLC12A6Q9UHW9 1150 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 NOCTQ9UK39 431 aaKnown RBP21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 CEP192Q8TEP8 1941 aa21.33■■□□□ 1.01
UBE2E3-201ENST00000392415 ZNF217O75362 1048 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 CCR1P32246 355 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 CD70P32970 193 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 SCNN1AP37088 669 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 NOMO3P69849 1222 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 CREB5Q02930 508 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 FUT11Q495W5 492 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 SPDYCQ5MJ68 293 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 RAP1GAP2Q684P5 730 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 ERLEC1Q96DZ1 483 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 SPAG5Q96R06 1193 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 VPS45Q9NRW7 570 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 RRN3Q9NYV6 651 aa21.32■■□□□ 1
UBE2E3-201ENST00000392415 MUC22E2RYF6 1773 aaPredicted RBP21.32■■□□□ 1
UBE2E3-201ENST00000392415 MAP3K13O43283 966 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 CAVIN2O95810 425 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 ATP1A3P13637 1013 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 ABCB4P21439 1286 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 TACR2P21452 398 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 PRKCHP24723 683 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 MATKP42679 507 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 CDR2Q01850 454 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 MTA1Q13330 715 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 SF3A2Q15428 464 aaKnown RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 MBLAC2Q68D91 279 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 SERPINA13PQ6UXR4 307 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 LPCAT2Q7L5N7 544 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 METTL3Q86U44 580 aaKnown RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 CHSY1Q86X52 802 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 XYLT1Q86Y38 959 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 LGI2Q8N0V4 545 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 CFAP52Q8N1V2 620 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 NEK11Q8NG66 645 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 NETO1Q8TDF5 533 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 PCMTD1Q96MG8 357 aaPredicted RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 NPY6RQ99463 290 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 PRMT1Q99873 361 aaKnown RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 MKRN2Q9H000 416 aaKnown RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 PLA2G4CQ9UP65 541 aa21.31■■□□□ 1
UBE2E3-201ENST00000392415 TNRC6BQ9UPQ9 1833 aaKnown RBP21.31■■□□□ 1
UBE2E3-201ENST00000392415 SYNJ2BP-COX16A0A087WUM0 186 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 IGHV1OR15-9A0A0B4J2B8 117 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 M0QYT0 321 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 SYNCRIPO60506 623 aaKnown RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 ATP5BP06576 529 aaKnown RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 DLDP09622 509 aaKnown RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 CHRNB2P17787 502 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 STAT1P42224 750 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 DHPSP49366 369 aaPredicted RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 LMAN2Q12907 356 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 PTPRNQ16849 979 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 SLC36A4Q6YBV0 504 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 DHX40Q8IX18 779 aaKnown RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 CARNMT1Q8N4J0 409 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 MSANTD4Q8NCY6 345 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 CYB5D2Q8WUJ1 264 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 SLC20A1Q8WUM9 679 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 CPA5Q8WXQ8 436 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 RNF34Q969K3 372 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 NT5C3BQ969T7 300 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 SLC6A17Q9H1V8 727 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 TMEM245Q9H330 911 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.3■■□□□ 1
UBE2E3-201ENST00000392415 COX16Q9P0S2 106 aa21.3■■□□□ 1
UBE2E3-201ENST00000392415 CDV3Q9UKY7 258 aaKnown RBP21.3■■□□□ 1
UBE2E3-201ENST00000392415 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 F5H5T6 163 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 GDF9O60383 454 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 LUC7L3O95232 432 aaKnown RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 CYP1A1P04798 512 aaPredicted RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 EPHX1P07099 455 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 POLR2EP19388 210 aaKnown RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 RNASE9P60153 205 aaKnown RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 FMO1Q01740 532 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 NME3Q13232 169 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 CDH18Q13634 790 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 FSCBQ5H9T9 825 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 FAM102AQ5T9C2 384 aaPredicted RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 OTUD1Q5VV17 481 aaPredicted RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 NAA35Q5VZE5 725 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 ERMP1Q7Z2K6 904 aa21.29■■□□□ 1
UBE2E3-201ENST00000392415 CCDC117Q8IWD4 279 aaPredicted RBP21.29■■□□□ 1
UBE2E3-201ENST00000392415 TMEFF1Q8IYR6 380 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms