RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 KIRREL3Q8IZU9 778 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 HSFY1Q96LI6 401 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 DSEQ9UL01 958 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 BANF1O75531 89 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 IL1BP01584 269 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 GM2AP17900 193 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 EPHB2P29323 1055 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 EFTUD2Q15029 972 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■□□□ 13.7
CSNK1D-203ENST00000392334 SCYL2Q6P3W7 929 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 ZNF449Q6P9G9 518 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 C3orf62Q6ZUJ4 267 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 CHSY1Q86X52 802 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 NPAS4Q8IUM7 802 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 ZMIZ2Q8NF64 920 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 TCP10LQ8TDR4 215 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM149B1Q96BN6 582 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 LRRC4Q9HBW1 653 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 NGRNQ9NPE2 291 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 ASNSD1Q9NWL6 643 aa20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 CORO1CQ9ULV4 474 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-203ENST00000392334 ABHD14A-ACY1A0A1B0GW23 586 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 GOLGA8MH3BSY2 632 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 TGDSO95455 350 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 CBX6O95503 412 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 ALDH2P05091 517 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 DHRS4L1P0CG22 281 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 SLC11A1P49279 550 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 TKTL1P51854 596 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 GDF10P55107 478 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 SNX16P57768 344 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 SEPT7Q16181 437 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 HADHQ16836 314 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 TMEM173Q86WV6 379 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.49■□□□□ 0.873e-6■■■■□ 20.4
CSNK1D-203ENST00000392334 FBXO36Q8NEA4 188 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 HSPH1Q92598 858 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 CNPY3Q9BT09 278 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 GPR62Q9BZJ7 368 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 NPHS2Q9NP85 383 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 IL23AQ9NPF7 189 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 USP18Q9UMW8 372 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 PCDHB8Q9UN66 801 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 CEP290O15078 2479 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 CST8O60676 142 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 DNAJC6O75061 913 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 PAX7P23759 505 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 KDELR1P24390 212 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 ACADSBP45954 432 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 RPL34P49207 117 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 ATXN1P54253 815 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 GAD2Q05329 585 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM171BQ6P995 826 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 RSAD2Q8WXG1 361 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 MRRFQ96E11 262 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 NUDCD1Q96RS6 583 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 PEBP4Q96S96 227 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 ADAM33Q9BZ11 813 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 MANSC1Q9H8J5 431 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 ADAM28Q9UKQ2 775 aa20.49■□□□□ 0.87
CSNK1D-203ENST00000392334 CD48P09326 243 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 SDC4P31431 198 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 WDR5P61964 334 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM171A1Q5VUB5 890 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 MTDHQ86UE4 582 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 ZDHHC17Q8IUH5 632 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 PDIK1LQ8N165 341 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 SIX6OS1Q8N1H7 587 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM172AQ8WUF8 416 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 PTPRSQ13332 1948 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 GCKP35557 465 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 TSPY1Q01534 308 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 FPGSQ05932 587 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 SLC18A2Q05940 514 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 SLC39A12Q504Y0 691 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 HFE2Q6ZVN8 426 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 PALM2Q8IXS6 379 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 KCNV2Q8TDN2 545 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 TOP1MTQ969P6 601 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 SMARCD1Q96GM5 515 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 CYTH2Q99418 400 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 PKMYT1Q99640 499 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 TRIM55Q9BYV6 548 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 DENND2DQ9H6A0 471 aaPredicted RBP20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 DCLRE1BQ9H816 532 aa20.48■□□□□ 0.87
CSNK1D-203ENST00000392334 DGKIO75912 1065 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM155BO75949 473 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 TMEM63AO94886 807 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 TRUB2O95900 331 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 USP17L7P0C7H9 530 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 TYMPP19971 482 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 ABL2P42684 1182 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 NEK3P51956 506 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 SLC26A9Q7LBE3 791 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 RFWD2Q8NHY2 731 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 DPF3Q92784 378 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 PTCD3Q96EY7 689 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 ULBP1Q9BZM6 244 aa20.47■□□□□ 0.87
CSNK1D-203ENST00000392334 MARCH5Q9NX47 278 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms