RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 ALDOAP04075 364 aaKnown RBP6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 PDIA3P30101 505 aaKnown RBP6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 GRK5P34947 590 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 SERPINF1P36955 418 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 SLC37A1P57057 533 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 TMEM88Q6PEY1 159 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 ZFYVE19Q96K21 471 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 TRMOQ9BU70 441 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 TUBB6Q9BUF5 446 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 MOV10Q9HCE1 1003 aaKnown RBP6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 RAB21Q9UL25 225 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3DA0A087WVF3 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3IA0A087WXS9 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3EA0A087X179 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3KA0A087X1G2 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3BA6NDS4 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3FA6NER0 549 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3LB9A6J9 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 F8W810 466 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 PRPF4O43172 522 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 KAT7O95251 611 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3HP0C7X1 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 CYP19A1P11511 503 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 PRF1P14222 555 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 IGFBP2P18065 325 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TGM2P21980 687 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 CDK7P50613 346 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 FOXL2P58012 376 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 RHBDL3P58872 404 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 SF3A3Q12874 501 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 CHAF1AQ13111 956 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3GQ6DHY5 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3CQ6IPX1 549 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ZNF793Q6ZN11 406 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ADGRF4Q8IZF3 695 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TBC1D3Q8IZP1 549 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ATG16L2Q8NAA4 619 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 MPLKIPQ8TAP9 179 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 HMGB4Q8WW32 186 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ZFPM2Q8WW38 1151 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 IGFBPL1Q8WX77 278 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 RTKNQ9BST9 563 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 PAPOLBQ9NRJ5 636 aaKnown RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 LIN7CQ9NUP9 197 aaKnown RBP6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 TAGLN3Q9UI15 199 aa6.59□□□□□ -1.35
SNORA40.4-201ENST00000390971 ZNF335Q9H4Z2 1342 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 CYP3A7-CYP3A51PA0A087WV96 503 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 CNTN5O94779 1100 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 BMP15O95972 392 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 CYP3A7P24462 503 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 ME1P48163 572 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 TAS2R50P59544 299 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 B4GALNT1Q00973 533 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 SRSF1Q07955 248 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 TWIST1Q15672 202 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 KLHL17Q6TDP4 642 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 RINLQ6ZS11 566 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 CCDC117Q8IWD4 279 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 POF1BQ8WVV4 589 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 RMDN3Q96TC7 470 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 MECRQ9BV79 373 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 DACT1Q9NYF0 836 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 HEY2Q9UBP5 337 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 TRPC5Q9UL62 973 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 HS3ST3B1Q9Y662 390 aa6.58□□□□□ -1.36
SNORA40.4-201ENST00000390971 UGDHO60701 494 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 ACTL6BO94805 426 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 CSTBP04080 98 aaKnown RBP6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 MTX1Q13505 466 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 BLMHQ13867 455 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 BTBD16Q32M84 506 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 TBRG1Q3YBR2 411 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 NFRKBQ6P4R8 1299 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 SLC44A2Q8IWA5 706 aaPredicted RBP6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 ARFGAP1Q8N6T3 406 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 ARL14EPQ8N8R7 260 aaPredicted RBP6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 VPS37AQ8NEZ2 397 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 OR1N1Q8NGS0 311 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 HTATIP2Q9BUP3 242 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 BRD8Q9H0E9 1235 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 MLXIPQ9HAP2 919 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
SNORA40.4-201ENST00000390971 LY6G6EA0A0G2JKS1 128 aa6.56□□□□□ -1.36
SNORA40.4-201ENST00000390971 SLC38A8A6NNN8 435 aa6.56□□□□□ -1.36
SNORA40.4-201ENST00000390971 GYS1P13807 737 aa6.56□□□□□ -1.36
SNORA40.4-201ENST00000390971 AP2B1P63010 937 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms