RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CABS1Q96KC9 395 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
ACTN4-202ENST00000390009 PLAC1Q9HBJ0 212 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 IKBKGQ9Y6K9 419 aa18.73■□□□□ 0.59
ACTN4-202ENST00000390009 NCAM2O15394 837 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 IRAK2O43187 625 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 C1QAP02745 245 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 EPHB2P29323 1055 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 CORO7P57737 925 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 CDK16Q00536 496 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 IFT88Q13099 833 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 PLEKHG4Q58EX7 1191 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 PIGWQ7Z7B1 504 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 MPP5Q8N3R9 675 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 PDCD7Q8N8D1 485 aaKnown RBP18.72■□□□□ 0.59
ACTN4-202ENST00000390009 DENND1AQ8TEH3 1009 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 SH3TC2Q8TF17 1288 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 MAGEB18Q96M61 343 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 PCDHB7Q9Y5E2 793 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 MAD1L1Q9Y6D9 718 aa18.72■□□□□ 0.59
ACTN4-202ENST00000390009 MYO1CO00159 1063 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 KCNK1O00180 336 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SYN3O14994 580 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 TYROBPO43914 113 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 KIAA0754O94854 1291 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 ASMTLO95671 621 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 INHBAP08476 426 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 CA4P22748 312 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 PSMB4P28070 264 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 RPA3P35244 121 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 PGFP49763 221 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 IL9RQ01113 521 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 VARS2Q5ST30 1063 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 UNC5AQ6ZN44 842 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SCD5Q86SK9 330 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 EBNA1BP2Q99848 306 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SSU72Q9NP77 194 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 EIF2B3Q9NR50 452 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SAMD15Q9P1V8 674 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 PLXNA3P51805 1871 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 TRDMT1O14717 391 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 ZNF189O75820 626 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 APOEP02649 317 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 GSTA2P09210 222 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 PPIDQ08752 370 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 NFE2Q16621 373 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 PARP6Q2NL67 630 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 NUGGCQ68CJ6 796 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 YTHDF3Q7Z739 585 aaKnown RBP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 FUBP3Q96I24 572 aaKnown RBP eCLIP18.71■□□□□ 0.59
ACTN4-202ENST00000390009 OSBPL2Q9H1P3 480 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 ARHGEF38Q9NXL2 777 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 ADAM28Q9UKQ2 775 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 SCN5AQ14524 2016 aa18.71■□□□□ 0.59
ACTN4-202ENST00000390009 IQANK1A0A1B0GTG1 560 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 DNM1LO00429 736 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 MLNP12872 115 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 PRKCHP24723 683 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CYP2C18P33260 490 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 SERPINB6P35237 376 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 GATMP50440 423 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CEP57Q86XR8 500 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CCDC197Q8NCU1 140 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 PAIP2Q9BPZ3 127 aaKnown RBP18.7■□□□□ 0.58
ACTN4-202ENST00000390009 ELAC2Q9BQ52 826 aaKnown RBP18.7■□□□□ 0.58
ACTN4-202ENST00000390009 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 NMUR1Q9HB89 426 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 FGFR1OP2Q9NVK5 253 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 IGSF9Q9P2J2 1179 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 SFMBT1Q9UHJ3 866 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 MX2P20592 715 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 PTPN3P26045 913 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 GBP2P32456 591 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-202ENST00000390009 SPARCL1Q14515 664 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 BRMS1LQ5PSV4 323 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 FAM171A1Q5VUB5 890 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 SDHAF4Q5VUM1 108 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 LRRC8BQ6P9F7 803 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 LRRC6Q86X45 466 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CTAGE3PQ8IX95 158 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 PPM1NQ8N819 430 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CASP10Q92851 521 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 HDAC11Q96DB2 347 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 CASD1Q96PB1 797 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 TRIM56Q9BRZ2 755 aaKnown RBP18.7■□□□□ 0.58
ACTN4-202ENST00000390009 BRD8Q9H0E9 1235 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 UNC93B1Q9H1C4 597 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 KLHL8Q9P2G9 620 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-202ENST00000390009 TRIM17Q9Y577 477 aa18.7■□□□□ 0.58
ACTN4-202ENST00000390009 MSI1O43347 362 aaKnown RBP18.69■□□□□ 0.58
ACTN4-202ENST00000390009 GARSP41250 739 aaKnown RBP18.69■□□□□ 0.58
ACTN4-202ENST00000390009 GPR15P49685 360 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 GALNT2Q10471 571 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 DDR2Q16832 855 aa18.69■□□□□ 0.58
ACTN4-202ENST00000390009 CTXN3Q4LDR2 81 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms