RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 COL27A1Q8IZC6 1860 aaPredicted RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 GOLGA6L7A0A1B0GV03 622 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 STX6O43752 255 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 SIN3BO75182 1162 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 RNASEH2AO75792 299 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 MPOP05164 745 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 DLDP09622 509 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 C7P10643 843 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 CKMT2P17540 419 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 PIK3CAP42336 1068 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 NUMBP49757 651 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 YWHAGP61981 247 aaKnown RBP eCLIP12.3□□□□□ -0.44
SOD1-202ENST00000389995 ZBTB16Q05516 673 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 E2F5Q15329 346 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 ZACNQ401N2 412 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 RFWD3Q6PCD5 774 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 SV2AQ7L0J3 742 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 SPATS2Q86XZ4 545 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 MMAAQ8IVH4 418 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 C12orf56Q8IXR9 622 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 DCBLD1Q8N8Z6 715 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 MYO19Q96H55 970 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 PNPLA8Q9NP80 782 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
SOD1-202ENST00000389995 UBE4BO95155 1302 aa12.3□□□□□ -0.44
SOD1-202ENST00000389995 B8ZZF3 427 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 TLR4O00206 839 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 TULP2O00295 520 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 MSI1O43347 362 aaKnown RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 CDK4P11802 303 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 MYF5P13349 255 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 ARRB1P49407 418 aaPredicted RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 AP3M2P53677 418 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 NXPH1P58417 271 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 PPP2CBP62714 309 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 PPP2CAP67775 309 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 KCNC4Q03721 635 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 INCA1Q0VD86 236 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 TRIP4Q15650 581 aaPredicted RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 KNOP1Q1ED39 458 aaKnown RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 C1orf220Q5T0J3 134 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 KANSL1Q7Z3B3 1105 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 KIAA0907Q7Z7F0 614 aaPredicted RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 AHI1Q8N157 1196 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 EDEM1Q92611 657 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 PLD4Q96BZ4 506 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 TMA16Q96EY4 203 aaKnown RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 SERAC1Q96JX3 654 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 CDK5RAP1Q96SZ6 601 aaKnown RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 OMDQ99983 421 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 STIM2Q9P246 746 aa12.29□□□□□ -0.44
SOD1-202ENST00000389995 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
SOD1-202ENST00000389995 TRIM38O00635 465 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 SIGLEC6O43699 453 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 SLC28A2O43868 658 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 TBL1XO60907 577 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 MT-CO3P00414 261 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 RPN1P04843 607 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 POLR2EP19388 210 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 CTSOP43234 321 aaPredicted RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 PSMD8P48556 350 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 HARS2P49590 506 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 PCBP4P57723 403 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 SNRPFP62306 86 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 RHDQ02161 417 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 CST6Q15828 149 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 KIAA1614Q5VZ46 1190 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 BHLHA9Q7RTU4 235 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 PIGZQ86VD9 579 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 GRAMD1CQ8IYS0 662 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 AADATQ8N5Z0 425 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.28□□□□□ -0.44
SOD1-202ENST00000389995 ZNF248Q8NDW4 579 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 OR2T34Q8NGX1 318 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 TTC9Q92623 222 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 GOLGA1Q92805 767 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 SKA1Q96BD8 255 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
SOD1-202ENST00000389995 C7orf25Q9BPX7 421 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 ULBP1Q9BZM6 244 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 TRIM4Q9C037 500 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 MMRN2Q9H8L6 949 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 SUN2Q9UH99 717 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 CA5BQ9Y2D0 317 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
SOD1-202ENST00000389995 AHCTF1Q8WYP5 2266 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms