RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ASB14A6NK59 587 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 HCRTO43612 131 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 CCDC166P0CW27 439 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 RBP3P10745 1247 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 LAMC2Q13753 1193 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 ATG16L1Q676U5 607 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 TRIM42Q8IWZ5 723 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 DEFB107AQ8IZN7 70 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 CMASQ8NFW8 434 aaPredicted RBP18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 SPATA18Q8TC71 538 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 KIF12Q96FN5 646 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 CATSPER2Q96P56 530 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 PRPF18Q99633 342 aaKnown RBP18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 FAM49BQ9NUQ9 324 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 FETUBQ9UGM5 382 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 ZNF711Q9Y462 761 aa18.21■□□□□ 0.5
SQSTM1-202ENST00000389805 H3BRB1 525 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 TSPAN1O60635 241 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 TRPA1O75762 1119 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 PDGFRAP16234 1089 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 CDH6P55285 790 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 SCYL2Q6P3W7 929 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 FAM183BPQ6ZVS7 135 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 PCGF5Q86SE9 256 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 PPP1R14CQ8TAE6 165 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 C7orf26Q96N11 449 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 TRIM56Q9BRZ2 755 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 NFKBIZQ9BYH8 718 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 PLLPQ9Y342 182 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 GMEB1Q9Y692 573 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 SERPINA6P08185 405 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 PFKMP08237 780 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 FDFT1P37268 417 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 CYLC2Q14093 348 aaPredicted RBP18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 TRIM67Q6ZTA4 783 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 CYP4V2Q6ZWL3 525 aaPredicted RBP18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 ARHGEF38Q9NXL2 777 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 POMPQ9Y244 141 aa18.2■□□□□ 0.5
SQSTM1-202ENST00000389805 FUT4P22083 530 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 FAM187BQ17R55 369 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 ADGRG6Q86SQ4 1221 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 ACOT1Q86TX2 421 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 ASB7Q9H672 318 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 LIN28AQ9H9Z2 209 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 CDH22Q9UJ99 828 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 BARX2Q9UMQ3 279 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 AK5Q9Y6K8 562 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 SBF1O95248 1867 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 VDRP11473 427 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 TNFAIP2Q03169 654 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 ITGA9Q13797 1035 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 TAZQ16635 292 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MARCH8Q5T0T0 291 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 PPP1R26Q5T8A7 1209 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 PMF1Q6P1K2 205 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 SCUBE3Q8IX30 993 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 GAB3Q8WWW8 586 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MRPL45Q9BRJ2 306 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MRPL1Q9BYD6 325 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 B3GNT5Q9BYG0 378 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MAGEB5Q9BZ81 275 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 NDUFA13Q9P0J0 144 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 NME7Q9Y5B8 376 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 MAD1L1Q9Y6D9 718 aa18.19■□□□□ 0.5
SQSTM1-202ENST00000389805 H3BSA7 217 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 KLF11O14901 512 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ITM2AO43736 263 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 MSX2P35548 267 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 GABRB2P47870 512 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ALDH1A3P47895 512 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 COPAP53621 1224 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ATXN3P54252 364 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ZNF792Q3KQV3 632 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 TEX44Q53QW1 395 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 CDHR5Q9HBB8 845 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 A0A1B0GTW7 788 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 SDR42E2A6NKP2 422 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 HMGCRP04035 888 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 STX3Q13277 289 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 C1QTNF12Q5T7M4 302 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 FAXCQ5TGI0 409 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 MROH9Q5TGP6 573 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 CCDC33Q8N5R6 958 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 GPRC5AQ8NFJ5 357 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 DCUN1D1Q96GG9 259 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 C1orf21Q9H246 121 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 SETD4Q9NVD3 440 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 ZNF232Q9UNY5 417 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 TRIP11Q15643 1979 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
SQSTM1-202ENST00000389805 E7ESA3 106 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms