RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 SPATA6LQ8N4H0 392 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 CAB39LQ9H9S4 337 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 KLHL8Q9P2G9 620 aaPredicted RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 AGRPO00253 132 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 DNAJA2O60884 412 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 NFKBIAP25963 317 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 NAGLUP54802 743 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 YWHAZP63104 245 aaKnown RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 GTF2BQ00403 316 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 BFSP2Q13515 415 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 GLRA4Q5JXX5 417 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 SEL1L3Q68CR1 1132 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 ZNF781Q8N8C0 355 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 NAT16Q8N8M0 369 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 COQ10BQ9H8M1 238 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 UBAP1Q9NZ09 502 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 C6orf203Q9P0P8 240 aaPredicted RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 COQ6Q9Y2Z9 468 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 TIPRLO75663 272 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 MGAT1P26572 445 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 IL1R2P27930 398 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 PIK3R1P27986 724 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 MPP5Q8N3R9 675 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 LRTOMTQ8WZ04 291 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 PRICKLE1Q96MT3 831 aaPredicted RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 BTBD9Q96Q07 612 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
SHOX-203ENST00000381578 FAM198AQ9UFP1 575 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 PCDHA10Q9Y5I2 948 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 COMMD10Q9Y6G5 202 aa12.47□□□□□ -0.41
SHOX-203ENST00000381578 APOC4-APOC2K7ER74 178 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 CRCPO75575 148 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 APOC2P02655 101 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 SDC4P31431 198 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 GABPAQ06546 454 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 Q3C1V9 767 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 HEATR4Q86WZ0 1026 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 OLIG1Q8TAK6 271 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 PTPRHQ9HD43 1115 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 XPNPEP3Q9NQH7 507 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 YDJCA8MPS7 323 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 PSMD12O00232 456 aaPredicted RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 VILLO15195 856 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 MED7O43513 233 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 ENTPD3O75355 529 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 LRCH4O75427 683 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 CLIC3O95833 236 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 HSPA8P11142 646 aaKnown RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 CDH3P22223 829 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 MMP8P22894 467 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 MPSTP25325 297 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 SLC5A2P31639 672 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 GJA8P48165 433 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 HSPA13P48723 471 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 STX1BP61266 288 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 YWHAEP62258 255 aaKnown RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 BNIP3Q12983 259 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 SLC9B1Q4ZJI4 515 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 AGKQ53H12 422 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 PITRM1Q5JRX3 1037 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 OTUD3Q5T2D3 398 aaPredicted RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 ZNF354CQ86Y25 554 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 OFCC1Q8IZS5 231 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 CCDC68Q9H2F9 335 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 PALMDQ9NP74 551 aa12.46□□□□□ -0.41
SHOX-203ENST00000381578 SSU72Q9NP77 194 aaKnown RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.41
SHOX-203ENST00000381578 MT-ND1P03886 318 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 GNA12Q03113 381 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.42
SHOX-203ENST00000381578 POTEHQ6S545 545 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 OR52B2Q96RD2 323 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 DDX43Q9NXZ2 648 aaKnown RBP12.46□□□□□ -0.42
SHOX-203ENST00000381578 EURLQ9NYK6 297 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 TMEM216Q9P0N5 145 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 ZNF70Q9UC06 446 aaPredicted RBP12.46□□□□□ -0.42
SHOX-203ENST00000381578 POLIQ9UNA4 740 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 ATP11BQ9Y2G3 1177 aa12.46□□□□□ -0.42
SHOX-203ENST00000381578 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
SHOX-203ENST00000381578 SPTLC1O15269 473 aa12.45□□□□□ -0.42
SHOX-203ENST00000381578 BUD23O43709 281 aaKnown RBP12.45□□□□□ -0.42
SHOX-203ENST00000381578 PIGNO95427 931 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms