RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PRKCHP24723 683 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 GPD2P43304 727 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 COPAP53621 1224 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 STX17P56962 302 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 UBE2HP62256 183 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 MTA1Q13330 715 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 TMEM215Q68D42 235 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 MBLAC2Q68D91 279 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 MINDY1Q8N5J2 469 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 KDM1BQ8NB78 822 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 DEFB124Q8NES8 71 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 FIBINQ8TAL6 211 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 FAM149B1Q96BN6 582 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 KREMEN1Q96MU8 473 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 GPR174Q9BXC1 333 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 SLC6A17Q9H1V8 727 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-202ENST00000381208 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 ABCB8Q9NUT2 735 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
RPAIN-202ENST00000381208 TNRC6BQ9UPQ9 1833 aaKnown RBP13.49□□□□□ -0.25
RPAIN-202ENST00000381208 GTPBP10A4D1E9 387 aaKnown RBP13.48□□□□□ -0.25
RPAIN-202ENST00000381208 METTL12A8MUP2 240 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 GIPC1O14908 333 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 TBL1XO60907 577 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 APOEP02649 317 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 SNX16P57768 344 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 ST8SIA6P61647 398 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-202ENST00000381208 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
RPAIN-202ENST00000381208 TMEM110Q86TL2 294 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 ADIPOR2Q86V24 386 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 DQX1Q8TE96 717 aaKnown RBP13.48□□□□□ -0.25
RPAIN-202ENST00000381208 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 MIS12Q9H081 205 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 SCML1Q9UN30 329 aa13.48□□□□□ -0.25
RPAIN-202ENST00000381208 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 RNASEH1O60930 286 aaKnown RBP13.47□□□□□ -0.25
RPAIN-202ENST00000381208 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-202ENST00000381208 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-202ENST00000381208 MOCS3O95396 460 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 DNTTP04053 509 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 GLI1P08151 1106 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 SLC2A3P11169 496 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 GNA15P30679 374 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 FOXC1Q12948 553 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 CDH18Q13634 790 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 SORCS1Q8WY21 1168 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 TTC17Q96AE7 1141 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 ERLEC1Q96DZ1 483 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 SLC39A13Q96H72 371 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 CKAP5Q14008 2032 aa13.47□□□□□ -0.25
RPAIN-202ENST00000381208 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 PIK3R2O00459 728 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-202ENST00000381208 THAP12O43422 761 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 CER1O95813 267 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 PROS1P07225 676 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 ZNF883P0CG24 379 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 OXCT1P55809 520 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 YWHAZP63104 245 aaKnown RBP13.46□□□□□ -0.25
RPAIN-202ENST00000381208 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 PTPRNQ16849 979 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 EXOC3L4Q17RC7 722 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 ZNF423Q2M1K9 1284 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 MS4A13Q5J8X5 152 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 DCAF12L1Q5VU92 463 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 RFWD3Q6PCD5 774 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 TRIM65Q6PJ69 517 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 MLKLQ8NB16 471 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 CYB5D2Q8WUJ1 264 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 BTN2A3PQ96KV6 586 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 FCRL2Q96LA5 508 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-202ENST00000381208 NOX5Q96PH1 765 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 PPP1R9BQ96SB3 815 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 SGK2Q9HBY8 427 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 OSGEPQ9NPF4 335 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 ASNSD1Q9NWL6 643 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
RPAIN-202ENST00000381208 TPX2Q9ULW0 747 aaKnown RBP13.46□□□□□ -0.25
RPAIN-202ENST00000381208 CEP192Q8TEP8 1941 aa13.46□□□□□ -0.26
RPAIN-202ENST00000381208 GJB3O75712 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms