RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDX1-201ENST00000381033 TDRD15B5MCY1 1934 aaKnown RBP17.7■□□□□ 0.42
PDX1-201ENST00000381033 PRPF4O43172 522 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDX1-201ENST00000381033 ADRA1BP35368 520 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 BMPR2Q13873 1038 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 PPP1R21Q6ZMI0 780 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 UNC5AQ6ZN44 842 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 NPWQ8N729 165 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 STAP1Q9ULZ2 295 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 ATXN2Q99700 1313 aaKnown RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 CFAP69A5D8W1 941 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 EEF2KO00418 725 aaKnown RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 NDC80O14777 642 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 RTN3O95197 1032 aaPredicted RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 F7P08709 466 aaPredicted RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 RANBP1P43487 201 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 SCTRP47872 440 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 NR2C2P49116 596 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 IL9RQ01113 521 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 ACTN3Q08043 901 aaPredicted RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 DSC3Q14574 896 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 KLHL38Q2WGJ6 581 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 RFX8Q6ZV50 586 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 ANKS4BQ8N8V4 417 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
PDX1-201ENST00000381033 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
PDX1-201ENST00000381033 RNF103O00237 685 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 LTFP02788 710 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 ERCC2P18074 760 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 MBTPS1Q14703 1052 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 CDHR3Q6ZTQ4 885 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 HACE1Q8IYU2 909 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 TMEM86AQ8N2M4 240 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 SLC44A1Q8WWI5 657 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 PHACTR1Q9C0D0 580 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 SPATA7Q9P0W8 599 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 MAGED2Q9UNF1 606 aaPredicted RBP17.68■□□□□ 0.42
PDX1-201ENST00000381033 USP12O75317 370 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 TOP3BO95985 862 aaKnown RBP17.68■□□□□ 0.42
PDX1-201ENST00000381033 CSH1P0DML2 217 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 CSH2P0DML3 217 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 PSMB4P28070 264 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 WASHC5Q12768 1159 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 NR1H3Q13133 447 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 XRCC4Q13426 336 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 TRPM8Q7Z2W7 1104 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 CCDC63Q8NA47 563 aa17.68■□□□□ 0.42
PDX1-201ENST00000381033 SHROOM3Q8TF72 1996 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 ZNF487B1APH4 448 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 FSBPO95073 299 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 ZFXP17010 805 aaPredicted RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 SESN2P58004 480 aaPredicted RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 LAMB3Q13751 1172 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 DPYSQ14117 519 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 BANPQ8N9N5 519 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 PTPRN2Q92932 1015 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 SMARCD1Q96GM5 515 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 NACA2Q9H009 215 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 ZNF623O75123 536 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 DDHD2O94830 711 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 UBOX5O94941 541 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 INHBAP08476 426 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 MAGEA3P43357 314 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 TRIM71Q2Q1W2 868 aaKnown RBP17.67■□□□□ 0.42
PDX1-201ENST00000381033 SDHAF4Q5VUM1 108 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 ZNF567Q8N184 647 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 ANKLE1Q8NAG6 615 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 DHRS1Q96LJ7 313 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 COLEC11Q9BWP8 271 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 TKTL2Q9H0I9 626 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 CNGB3Q9NQW8 809 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 TMEM98Q9Y2Y6 226 aa17.67■□□□□ 0.42
PDX1-201ENST00000381033 A0A0A0MRY4 1105 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 DCLK1O15075 740 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 MAGEA6P43360 314 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 ITIH4Q14624 930 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 ZNF276Q8N554 614 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 FITM2Q8N6M3 262 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 SPATA13Q96N96 652 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 RETREG1Q9H6L5 497 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 PHTF1Q9UMS5 762 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 TRIM49D1C9J1S8 452 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 H3BRJ5 948 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 TIMM44O43615 452 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 ODC1P11926 461 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 RPL9P32969 192 aaKnown RBP17.66■□□□□ 0.42
PDX1-201ENST00000381033 RASA2Q15283 850 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 MTFR1Q15390 333 aa17.66■□□□□ 0.42
PDX1-201ENST00000381033 INTS6LQ5JSJ4 861 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms