RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TREHO43280 583 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 LYNP07948 512 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 SERPINA6P08185 405 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ATICP31939 592 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 GTF2A2P52657 109 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 DSG1Q02413 1049 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 N4BP2L1Q5TBK1 243 aaPredicted RBP16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 MBLAC2Q68D91 279 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CES3Q6UWW8 571 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 OLFML1Q6UWY5 402 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 MAP7D3Q8IWC1 876 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 EBF3Q9H4W6 596 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 NRDE2Q9H7Z3 1164 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 PNPOQ9NVS9 261 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
NKX3-1-201ENST00000380871 CD1EP15812 388 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 TEDDM1Q5T9Z0 273 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 ABHD16BQ9H3Z7 469 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 GBA2Q9HCG7 927 aaPredicted RBP16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 ZNF358Q9NW07 568 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 MAGEA13PA6NCF6 341 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 F8W8V4 182 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 RNASEH1O60930 286 aaKnown RBP16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 FGF3P11487 239 aaPredicted RBP16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 OLIG2Q13516 323 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 HIC1Q14526 733 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 LPCAT4Q643R3 524 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 KCNT2Q6UVM3 1135 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 SH3GL3Q99963 347 aa16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 OXCT2Q9BYC2 517 aaPredicted RBP16.73■□□□□ 0.27
NKX3-1-201ENST00000380871 TGM2P21980 687 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 SESN2P58004 480 aaPredicted RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 AP2B1P63010 937 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PDE1CQ14123 709 aaPredicted RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 FAM187BQ17R55 369 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PYROXD2Q8N2H3 581 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 BEST2Q8NFU1 509 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 THAP1Q9NVV9 213 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 TIMM13Q9Y5L4 95 aaPredicted RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 CLDN5O00501 218 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 STRNO43815 780 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 LINC01465Q8N7H1 131 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 ATXN7L3BQ96GX2 97 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 ACSS2Q9NR19 701 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 TMPRSS4Q9NRS4 437 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PACSIN3Q9UKS6 424 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PCDHA11Q9Y5I1 949 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 LOC100653049A0A140TA62 436 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 BUD23O43709 281 aaKnown RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 KRT34O76011 436 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 CTSHP09668 335 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 GRM5P41594 1212 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 ZRSR2Q15696 482 aaKnown RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 DNAL1Q4LDG9 190 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 ISLR2Q6UXK2 745 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 C10orf107Q8IVU9 208 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 LGMNQ99538 433 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 MKS1Q9NXB0 559 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 SOX13Q9UN79 622 aa16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 MRPL42Q9Y6G3 142 aaKnown RBP16.72■□□□□ 0.27
NKX3-1-201ENST00000380871 PROCP04070 461 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 VAV1P15498 845 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 MAGEA6P43360 314 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SLC1A6P48664 564 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 WASHC5Q12768 1159 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 PDK2Q15119 407 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SOWAHAQ2M3V2 549 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 C6orf163Q5TEZ5 329 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SLC27A1Q6PCB7 646 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 FAM131BQ86XD5 332 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 PIWIL2Q8TC59 973 aaKnown RBP16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 MOCOSQ96EN8 888 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SNX25Q9H3E2 840 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 KIF3CO14782 793 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SPTLC1O15269 473 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SIN3BO75182 1162 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 PCLAFQ15004 111 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 BOLA3Q53S33 107 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 TCHHL1Q5QJ38 904 aaPredicted RBP16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 OLFML2BQ68BL8 750 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 GALNT15Q8N3T1 639 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 AGR3Q8TD06 166 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 SLC26A7Q8TE54 656 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.27
NKX3-1-201ENST00000380871 A0A1B0GVG6 124 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 PRKCGP05129 697 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms