RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ADAM2Q99965 735 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 COLEC11Q9BWP8 271 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 WDCPQ9H6R7 721 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 DMAP1Q9NPF5 467 aaPredicted RBP12.99□□□□□ -0.33
VPS16-202ENST00000380445 IGSF9Q9P2J2 1179 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 TSC2P49815 1807 aa12.99□□□□□ -0.33
VPS16-202ENST00000380445 FAM159BA6NKW6 160 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 TRIM49D1C9J1S8 452 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 HHLA1C9JL84 531 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 COPEO14579 308 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 DCTN3O75935 186 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 PYGBP11216 843 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ERCC2P18074 760 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 MX2P20592 715 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SERPINB6P35237 376 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 NEK3P51956 506 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 BNIP1Q12981 228 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SEMA3BQ13214 749 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 PM20D1Q6GTS8 502 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CYB5D1Q6P9G0 228 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 GPRIN1Q7Z2K8 1008 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CHSY1Q86X52 802 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CDKL2Q92772 493 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ITFG2Q969R8 447 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SERAC1Q96JX3 654 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
VPS16-202ENST00000380445 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ANKRD33BA6NCL7 494 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 M0QZQ0 153 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CABYRO75952 493 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 TROVE2P10155 538 aaKnown RBP eCLIP12.98□□□□□ -0.33
VPS16-202ENST00000380445 PRKCZQ05513 592 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 LPIN1Q14693 890 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 AP1ARQ63HQ0 302 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SH2D5Q6ZV89 423 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 BEND5Q7L4P6 421 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SMC1BQ8NDV3 1235 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
VPS16-202ENST00000380445 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 TMPRSS4Q9NRS4 437 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
VPS16-202ENST00000380445 TTC36A6NLP5 189 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 MGEA5O60502 916 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 NEFHP12036 1026 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CXCR3P49682 368 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 TSPY1Q01534 308 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 FAM26DQ5JW98 314 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 STEAP4Q687X5 459 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CASC4Q6P4E1 433 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 DCLRE1AQ6PJP8 1040 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 FITM2Q8N6M3 262 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
VPS16-202ENST00000380445 ADAM32Q8TC27 787 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 MOCS1Q9NZB8 636 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 SLC17A7Q9P2U7 560 aa12.98□□□□□ -0.33
VPS16-202ENST00000380445 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
VPS16-202ENST00000380445 DHRS4L1P0CG22 281 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 BDNFP23560 247 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 SKIV2L2P42285 1042 aaKnown RBP12.97□□□□□ -0.33
VPS16-202ENST00000380445 CACNA2D1P54289 1103 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 NAB1Q13506 487 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 OVOS1Q6IE37 1185 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
VPS16-202ENST00000380445 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 TRIM42Q8IWZ5 723 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 RTP3Q9BQQ7 232 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 PLAC1Q9HBJ0 212 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 MKS1Q9NXB0 559 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 ATP5HO75947 161 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 CYP2C18P33260 490 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 GRIA1P42261 906 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 ETV4P43268 484 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 BRCC3P46736 316 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 TRIM32Q13049 653 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 FAM182AQ5T1J6 154 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 BSPRYQ5W0U4 402 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 HHIPL1Q96JK4 782 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 RMDN2Q96LZ7 410 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 LRRC37BQ96QE4 947 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 VAT1Q99536 393 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
VPS16-202ENST00000380445 SPATS2LQ9NUQ6 558 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms