RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ATF5Q9Y2D1 282 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SLC27A5Q9Y2P5 690 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 RNF11Q9Y3C5 154 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CAPN14A8MX76 684 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 VWA5AO00534 786 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 KLRC4O43908 158 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CLPXO76031 633 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 EGFRP00533 1210 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ABCG1P45844 678 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 BAG6P46379 1132 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 BCAMP50895 628 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 GPLD1P80108 840 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 STAT4Q14765 748 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 LLGL1Q15334 1064 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 PLEKHG7Q6ZR37 379 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 HEATR3Q7Z4Q2 680 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TPH2Q8IWU9 490 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SIX6OS1Q8N1H7 587 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF420Q8TAQ5 688 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 TRIB2Q92519 343 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 PIK3R3Q92569 461 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SYN2Q92777 582 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-204ENST00000380393 CLSTN3Q9BQT9 956 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 MANSC1Q9H8J5 431 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 SLC45A1Q9Y2W3 748 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
PTPRA-204ENST00000380393 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 MUSKO15146 869 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SHOXO15266 292 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PDPK1O15530 556 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CCNT2O60583 730 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 KPNA6O60684 536 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 MX2P20592 715 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 OPRL1P41146 370 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 ST13P50502 369 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 OLR1P78380 273 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 NFATC3Q12968 1075 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 TAF5Q15542 800 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 MAPRE2Q15555 327 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PKN2Q16513 984 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RALGPS1Q5JS13 557 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 ALKBH5Q6P6C2 394 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 FKBP9P1Q75LS8 142 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CYFIP1Q7L576 1253 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SLFN11Q7Z7L1 901 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SLC22A16Q86VW1 577 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LRRC71Q8N4P6 559 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 EFCAB3Q8N7B9 438 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 INTS12Q96CB8 462 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 NAA50Q9GZZ1 169 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 GHITMQ9H3K2 345 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SEMA6BQ9H3T3 888 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 DNAJC12Q9UKB3 198 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 NUP50Q9UKX7 468 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 POMPQ9Y244 141 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SNX8Q9Y5X2 465 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 A0A087WXM4 84 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 FAM237BA0A1B0GVD1 139 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 EXOC1LA0A1B0GW35 172 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CCNKO75909 580 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 HSD17B2P37059 387 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 GYG1P46976 350 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 KCNJ1P48048 391 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CLCQ05315 142 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 UBE2SQ16763 222 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 DUSP7Q16829 419 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 FAM91A1Q658Y4 838 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 AADACL2Q6P093 401 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF704Q6ZNC4 412 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LINC00518Q8N0U6 118 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PRELID2Q8N945 189 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LRRC20Q8TCA0 184 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 C9orf72Q96LT7 481 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 HMG20AQ9NP66 347 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CHST12Q9NRB3 414 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 GMEB2Q9UKD1 530 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RNF112Q9ULX5 631 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 HCN4Q9Y3Q4 1203 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 ZHX2Q9Y6X8 837 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 UBR3Q6ZT12 1888 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PSME4Q14997 1843 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RREB1Q92766 1687 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RTL9Q8NET4 1388 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LINC01387J3KSC0 135 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 TSPAN4O14817 238 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 OR7A10O76100 309 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 DLDP09622 509 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CCNA2P20248 432 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms