RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TRAF3IP3Q9Y228 551 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 AK5Q9Y6K8 562 aa18.52■□□□□ 0.56
PDLIM4-202ENST00000379018 GOLGA6L7A0A1B0GV03 622 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 PIK3R2O00459 728 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ENC1O14682 589 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 MAPK13O15264 365 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 IGHV4-34P06331 123 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ITGAVP06756 1048 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 PFKFB1P16118 471 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 PSMC2P35998 433 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 MXI1P50539 228 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 DNM1Q05193 864 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ZBTB16Q05516 673 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ADGRF1Q5T601 910 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 BSPRYQ5W0U4 402 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ARHGAP17Q68EM7 881 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 NCEH1Q6PIU2 408 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 BHLHA9Q7RTU4 235 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 DHX40Q8IX18 779 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 UBA3Q8TBC4 463 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 ORAI3Q9BRQ5 295 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 PABPC3Q9H361 631 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 FBRSQ9HAH7 460 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 HESX1Q9UBX0 185 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 SUN2Q9UH99 717 aa18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 HBS1LQ9Y450 684 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-202ENST00000379018 A0A1B0GTQ1 180 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 A0A1W2PP55 124 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 YJEFN3A6XGL0 299 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 E7ENQ6 273 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 RNASEH2AO75792 299 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 LDOC1O95751 146 aaPredicted RBP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 LCP1P13796 627 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 HNF1BP35680 557 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 ZNF445P59923 1031 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 ST8SIA6P61647 398 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 RACK1P63244 317 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 ADAM9Q13443 819 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 C6orf118Q5T5N4 469 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 PM20D1Q6GTS8 502 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 TMPRSS12Q86WS5 348 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 MFN1Q8IWA4 741 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 EID2Q8N6I1 236 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 UBL7Q96S82 380 aaPredicted RBP18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
PDLIM4-202ENST00000379018 A0A1W2PPC4 97 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 XPO1O14980 1071 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 MID1O15344 667 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 SIN3BO75182 1162 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 RFPL3O75679 317 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 WNT1P04628 370 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 RPL13P26373 211 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 NUMBP49757 651 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 RGS7P49802 495 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 C19orf57Q0VDD7 668 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 BST2Q10589 180 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 SGO2Q562F6 1265 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 LRRC69Q6ZNQ3 347 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 MMAAQ8IVH4 418 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 CARNMT1Q8N4J0 409 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 TTC39CQ8N584 583 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 FBXL13Q8NEE6 735 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 ELF4Q99607 663 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 RAB20Q9NX57 234 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 MYLKQ15746 1914 aa18.49■□□□□ 0.55
PDLIM4-202ENST00000379018 VILLO15195 856 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 TLX3O43711 291 aaPredicted RBP18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 RNASEH1O60930 286 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 SLC6A4P31645 630 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 PSMD8P48556 350 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 GALCP54803 685 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 DCAF17Q5H9S7 520 aaPredicted RBP18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 HES3Q5TGS1 186 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 TCERG1LQ5VWI1 586 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 SLC39A7Q92504 469 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 SKA1Q96BD8 255 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 OMDQ99983 421 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 RSPH9Q9H1X1 276 aaPredicted RBP18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 NEUROG2Q9H2A3 272 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 EBF2Q9HAK2 575 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 CFAP45Q9UL16 551 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 CEP83Q9Y592 693 aa18.48■□□□□ 0.55
PDLIM4-202ENST00000379018 LRRC72A6NJI9 287 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 WNT9AO14904 365 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 DFNA5O60443 496 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 EIF2S3P41091 472 aaKnown RBP18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 CSKP41240 450 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 SLC11A2P49281 568 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 TARDBPQ13148 414 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 PKP1Q13835 747 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 CST6Q15828 149 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 PIK3R6Q5UE93 754 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 MMS22LQ6ZRQ5 1243 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 USP30Q70CQ3 517 aa18.47■□□□□ 0.55
PDLIM4-202ENST00000379018 KIAA0907Q7Z7F0 614 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms