RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CFAP73A6NFT4 308 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 SMAPO00193 183 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 DGKIO75912 1065 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 DPYSQ14117 519 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 HIF1AQ16665 826 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 GALNTL6Q49A17 601 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 NUGGCQ68CJ6 796 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 RSPO2Q6UXX9 243 aaPredicted RBP20.02■□□□□ 0.79
SSU72-204ENST00000378726 ZBED8Q8IZ13 594 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 NETO2Q8NC67 525 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 ECT2Q9H8V3 914 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 NMUR1Q9HB89 426 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 RAB6BQ9NRW1 208 aa20.02■□□□□ 0.79
SSU72-204ENST00000378726 PTPRDP23468 1912 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 CPB1P15086 417 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 MAGEA11P43364 429 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 ALDH7A1P49419 539 aaKnown RBP20.01■□□□□ 0.79
SSU72-204ENST00000378726 ARL4CP56559 192 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 SEMA3BQ13214 749 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 FASTKD3Q14CZ7 662 aaKnown RBP20.01■□□□□ 0.79
SSU72-204ENST00000378726 FNBP1LQ5T0N5 605 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 CCDC110Q8TBZ0 833 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 TFB1MQ8WVM0 346 aaKnown RBP20.01■□□□□ 0.79
SSU72-204ENST00000378726 CKAP2Q8WWK9 683 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 OLFM3Q96PB7 478 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 OR12D3Q9UGF7 316 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 SUFUQ9UMX1 484 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 SLC27A5Q9Y2P5 690 aa20.01■□□□□ 0.79
SSU72-204ENST00000378726 A0A1W2PQH9 124 aa20■□□□□ 0.79
SSU72-204ENST00000378726 MFSD11O43934 449 aa20■□□□□ 0.79
SSU72-204ENST00000378726 TMEM63AO94886 807 aa20■□□□□ 0.79
SSU72-204ENST00000378726 IGLV3-25P01717 112 aa20■□□□□ 0.79
SSU72-204ENST00000378726 ERCC2P18074 760 aa20■□□□□ 0.79
SSU72-204ENST00000378726 HCAR3P49019 387 aa20■□□□□ 0.79
SSU72-204ENST00000378726 TPI1P60174 286 aa20■□□□□ 0.79
SSU72-204ENST00000378726 GPR17Q13304 367 aa20■□□□□ 0.79
SSU72-204ENST00000378726 EIF4EBP2Q13542 120 aaPredicted RBP20■□□□□ 0.79
SSU72-204ENST00000378726 ACCSLQ4AC99 568 aa20■□□□□ 0.79
SSU72-204ENST00000378726 HEATR6Q6AI08 1181 aaKnown RBP20■□□□□ 0.79
SSU72-204ENST00000378726 CNKSR3Q6P9H4 555 aa20■□□□□ 0.79
SSU72-204ENST00000378726 TTC9BQ8N6N2 239 aa20■□□□□ 0.79
SSU72-204ENST00000378726 BCL7CQ8WUZ0 217 aaPredicted RBP20■□□□□ 0.79
SSU72-204ENST00000378726 QKIQ96PU8 341 aaKnown RBP eCLIP20■□□□□ 0.79
SSU72-204ENST00000378726 TTPALQ9BTX7 342 aa20■□□□□ 0.79
SSU72-204ENST00000378726 FBXO44Q9H4M3 255 aa20■□□□□ 0.79
SSU72-204ENST00000378726 SFMBT1Q9UHJ3 866 aa20■□□□□ 0.79
SSU72-204ENST00000378726 SCML2Q9UQR0 700 aa20■□□□□ 0.79
SSU72-204ENST00000378726 SNX10Q9Y5X0 201 aa20■□□□□ 0.79
SSU72-204ENST00000378726 DYNC1LI1Q9Y6G9 523 aaKnown RBP20■□□□□ 0.79
SSU72-204ENST00000378726 HACD1B0YJ81 288 aa20■□□□□ 0.79
SSU72-204ENST00000378726 H7C4K7 107 aa20■□□□□ 0.79
SSU72-204ENST00000378726 DCLK1O15075 740 aa20■□□□□ 0.79
SSU72-204ENST00000378726 TBC1D4O60343 1298 aa20■□□□□ 0.79
SSU72-204ENST00000378726 NQO1P15559 274 aaKnown RBP20■□□□□ 0.79
SSU72-204ENST00000378726 PAFAH1B3Q15102 231 aaKnown RBP20■□□□□ 0.79
SSU72-204ENST00000378726 SYCP2LQ5T4T6 812 aa20■□□□□ 0.79
SSU72-204ENST00000378726 MON1AQ86VX9 555 aa20■□□□□ 0.79
SSU72-204ENST00000378726 GPR152Q8TDT2 470 aa20■□□□□ 0.79
SSU72-204ENST00000378726 VWCEQ96DN2 955 aa20■□□□□ 0.79
SSU72-204ENST00000378726 TTC25Q96NG3 672 aa20■□□□□ 0.79
SSU72-204ENST00000378726 LGMNQ99538 433 aa20■□□□□ 0.79
SSU72-204ENST00000378726 NUDT5Q9UKK9 219 aa20■□□□□ 0.79
SSU72-204ENST00000378726 VWA8A3KMH1 1905 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 GCATO75600 419 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 SUN1O94901 812 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 BRAFP15056 766 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 ATP5DP30049 168 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 MSS51Q4VC12 460 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 TLDC1Q6P9B6 456 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 ANKS3Q6ZW76 656 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 CASP10Q92851 521 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 CCDC77Q9BR77 488 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 NR2E3Q9Y5X4 410 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 BANF1O75531 89 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 SOAT2O75908 522 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 CLTBP09497 229 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 USP46P62068 366 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 RIPK1Q13546 671 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 KCNJ11Q14654 390 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 PRSS55Q6UWB4 352 aaPredicted RBP19.99■□□□□ 0.79
SSU72-204ENST00000378726 RNF19BQ6ZMZ0 732 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 ANKMY2Q8IV38 441 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 PDIK1LQ8N165 341 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 HTR3CQ8WXA8 447 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 STAMBPL1Q96FJ0 436 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 PAWRQ96IZ0 340 aaKnown RBP19.99■□□□□ 0.79
SSU72-204ENST00000378726 KLC2Q9H0B6 622 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 ETNK1Q9HBU6 452 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 OSER1Q9NX31 292 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 TBK1Q9UHD2 729 aa19.99■□□□□ 0.79
SSU72-204ENST00000378726 MTMR11A4FU01 709 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 CHADO15335 359 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 IRAK2O43187 625 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 GJA8P48165 433 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 BNIP1Q12981 228 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 PDK1Q15118 436 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 ZKSCAN8Q15776 578 aaPredicted RBP19.98■□□□□ 0.79
SSU72-204ENST00000378726 FAXCQ5TGI0 409 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 FBXO46Q6PJ61 603 aaPredicted RBP19.98■□□□□ 0.79
SSU72-204ENST00000378726 C4orf22Q6V702 233 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms