RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TPSAB1Q15661 275 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 HEATR6Q6AI08 1181 aaKnown RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 UGT2A3Q6UWM9 527 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 RNF19AQ9NV58 838 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 MTMR10Q9NXD2 777 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 DTLQ9NZJ0 730 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 BARX2Q9UMQ3 279 aaPredicted RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 PTPRFP10586 1907 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 PABPC4LP0CB38 370 aaKnown RBP18.49■□□□□ 0.55
GNE-201ENST00000377902 TYK2P29597 1187 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 SERPINB5P36952 375 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 IGBP1P78318 339 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 DYNC1I2Q13409 638 aaKnown RBP18.49■□□□□ 0.55
GNE-201ENST00000377902 LSAMPQ13449 338 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 PPM1LQ5SGD2 360 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 CCDC185Q8N715 623 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 HAPLN3Q96S86 360 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 ZNF670Q9BS34 389 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 TMPRSS4Q9NRS4 437 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 HESX1Q9UBX0 185 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 COX4I1P13073 169 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 DPEP1P16444 411 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 HSPA1LP34931 641 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 SEMA5AQ13591 1074 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 GRM2Q14416 872 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 EFCAB12Q6NXP0 572 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 KBTBD6Q86V97 674 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 ADAM32Q8TC27 787 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 CMTM5Q96DZ9 223 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 OR52B2Q96RD2 323 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 DNAJC28Q9NX36 388 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 SYBUQ9NX95 663 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 NME7Q9Y5B8 376 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 EVPLQ92817 2033 aa18.49■□□□□ 0.55
GNE-201ENST00000377902 AIM2O14862 343 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 ATP5BP06576 529 aaKnown RBP18.48■□□□□ 0.55
GNE-201ENST00000377902 GOT1P17174 413 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 CCR10P46092 362 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 DLG2Q15700 870 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 PAOXQ6QHF9 649 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 TMC7Q7Z402 723 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 SPATA24Q86W54 205 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 COLGALT1Q8NBJ5 622 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 DNERQ8NFT8 737 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 DNAJC1Q96KC8 554 aaKnown RBP18.48■□□□□ 0.55
GNE-201ENST00000377902 LENG8Q96PV6 779 aaPredicted RBP18.48■□□□□ 0.55
GNE-201ENST00000377902 KCTD15Q96SI1 283 aaPredicted RBP18.48■□□□□ 0.55
GNE-201ENST00000377902 CAB39LQ9H9S4 337 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 UBAP1Q9NZ09 502 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 SEPT10Q9P0V9 454 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 DCDC2Q9UHG0 476 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 C15orf38-AP3S2A0A0A6YYH1 394 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 CHN2P52757 468 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 SLC6A3Q01959 620 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 NCBP2-AS2Q69YL0 99 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 ARPINQ7Z6K5 226 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 TP53INP2Q8IXH6 220 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 RNF148Q8N7C7 305 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 COPS5Q92905 334 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 ATP2A3Q93084 1043 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 CSPG4P5Q96PW8 444 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 WDR55Q9H6Y2 383 aaPredicted RBP18.48■□□□□ 0.55
GNE-201ENST00000377902 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
GNE-201ENST00000377902 IGKV6-21A0A0C4DH24 114 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 IL18RAPO95256 599 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 PYGLP06737 847 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 ALDH1A3P47895 512 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 IRF9Q00978 393 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
GNE-201ENST00000377902 ANKRD20A4Q4UJ75 823 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 STEAP4Q687X5 459 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 ICA1LQ8NDH6 482 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.55
GNE-201ENST00000377902 HTR3CQ8WXA8 447 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 OLFM3Q96PB7 478 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 MRPL45Q9BRJ2 306 aaKnown RBP18.47■□□□□ 0.55
GNE-201ENST00000377902 SIKE1Q9BRV8 207 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 NT5C1AQ9BXI3 368 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 VCX3BQ9H321 246 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 VCX3AQ9NNX9 186 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 AP4E1Q9UPM8 1137 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 HES2Q9Y543 173 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 NEMP1O14524 444 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 MDM4O15151 490 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 USP12O75317 370 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 DGKIO75912 1065 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 AMHP03971 560 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 SMIM18P0DKX4 95 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 CPA3P15088 417 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 MTTPP55157 894 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 KLF10Q13118 480 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 AMHR2Q16671 573 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 FCRL3Q96P31 734 aaPredicted RBP18.47■□□□□ 0.55
GNE-201ENST00000377902 QKIQ96PU8 341 aaKnown RBP eCLIP18.47■□□□□ 0.55
GNE-201ENST00000377902 GPR20Q99678 358 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms