RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SEC13P55735 322 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 LRRC14Q15048 493 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 LRRC26Q2I0M4 334 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 FBXO38Q6PIJ6 1188 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ARHGEF2Q92974 986 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 LGMNQ99538 433 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 HNRNPABQ99729 332 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SMG9Q9H0W8 520 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 AASDHPPTQ9NRN7 309 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 DUS2Q9NX74 493 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 DNPEPQ9ULA0 475 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 PHF24Q9UPV7 400 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SNX10Q9Y5X0 201 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ABCA3Q99758 1704 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 NVLO15381 856 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 RFPL2O75678 378 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 RHOBTB1O94844 696 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CHEK2O96017 543 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ADH1CP00326 375 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 KDELR1P24390 212 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 HOXA11P31270 313 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ADRA1BP35368 520 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 MAGEA4P43358 317 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 GJA8P48165 433 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 THOP1P52888 689 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CDCA2Q69YH5 1023 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PHACTR4Q8IZ21 702 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 OR2W6PQ8NHA6 318 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ZNF461Q8TAF7 563 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 FAM71BQ8TC56 605 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ABHD8Q96I13 439 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 UNKQ9C0B0 810 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 UTP6Q9NYH9 597 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 EPHX1P07099 455 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 NCF2P19878 526 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 GDI1P31150 447 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 HADHAP40939 763 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 AFF1P51825 1210 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 FAM187BQ17R55 369 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 LONRF1Q17RB8 773 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PREPLQ4J6C6 727 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ERAP2Q6P179 960 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 LINC00523Q86TU6 105 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 LZTR1Q8N653 840 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 HJURPQ8NCD3 748 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ARHGEF4Q9NR80 690 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 RGS18Q9NS28 235 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 OGFRQ9NZT2 677 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ZSCAN5DPP0CG00 497 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ATXN1P54253 815 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ADCY2Q08462 1091 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CCDC142Q17RM4 750 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PPIL6Q8IXY8 311 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 C4orf33Q8N1A6 199 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 SMG8Q8ND04 991 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 MAML1Q92585 1016 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PPP1R36Q96LQ0 422 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 SEMA3CQ99985 751 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 SPTA1P02549 2419 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 RIF1Q5UIP0 2472 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 NCAM2O15394 837 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 NDUFS2O75306 463 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 MAGOHP61326 146 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CENPCQ03188 943 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 CEP68Q76N32 757 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 RNF217Q8TC41 542 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 BCAS4Q8TDM0 211 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 SH3RF2Q8TEC5 729 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PCDHB9Q9Y5E1 797 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 PTPRJQ12913 1337 aa8.68□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3DA0A087WVF3 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3IA0A087WXS9 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3EA0A087X179 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3KA0A087X1G2 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3FA6NER0 549 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3LB9A6J9 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 PIGRP01833 764 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3HP0C7X1 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 ITGALP20701 1170 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 HOXD13P35453 343 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 EIF3BP55884 814 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 STX1BP61266 288 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 IMPG1Q17R60 797 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3GQ6DHY5 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3CQ6IPX1 549 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 PHF13Q86YI8 300 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TBC1D3Q8IZP1 549 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 GDPD5Q8WTR4 605 aa8.67□□□□□ -1.02
CRNKL1-202ENST00000377340 TMEM209Q96SK2 561 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms