RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CCL15Q16663 113 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 NAIF1Q69YI7 327 aaPredicted RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 PACS1Q6VY07 963 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SKA1Q96BD8 255 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 C16orf70Q9BSU1 422 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
USP11-204ENST00000377107 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 HBS1LQ9Y450 684 aaKnown RBP13.29□□□□□ -0.28
USP11-204ENST00000377107 A0A0A0MRY4 1105 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 ITGA2BP08514 1039 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 GRM5P41594 1212 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 POLE2P56282 527 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 PDE1CQ14123 709 aaPredicted RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 SLC9A4Q6AI14 798 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 CHSY1Q86X52 802 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 CCNYL1Q8N7R7 359 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 MFSD3Q96ES6 412 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 PTCD3Q96EY7 689 aaKnown RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 SPATA13Q96N96 652 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 RHOBTB2Q9BYZ6 727 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 DFFAO00273 331 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 AIM2O14862 343 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 MOCS2O96007 188 aaPredicted RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 JCHAINP01591 159 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 POLBP06746 335 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 SERPINB5P36952 375 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 TAF6P49848 677 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 ZNF398Q8TD17 642 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 ULBP1Q9BZM6 244 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 BFARQ9NZS9 450 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 TAGLN3Q9UI15 199 aa13.28□□□□□ -0.28
USP11-204ENST00000377107 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
USP11-204ENST00000377107 FAM72CH0Y354 149 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 PHGDHO43175 533 aaKnown RBP13.27□□□□□ -0.28
USP11-204ENST00000377107 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.28
USP11-204ENST00000377107 RALBP11234 206 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 HOXA11P31270 313 aaPredicted RBP13.27□□□□□ -0.28
USP11-204ENST00000377107 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.28
USP11-204ENST00000377107 SEPT6Q14141 434 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 ANO7Q6IWH7 933 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 IZUMO2Q6UXV1 221 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 FAM72BQ86X60 149 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 MARK4Q96L34 752 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 TSNARE1Q96NA8 513 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 BATF3Q9NR55 127 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 IARS2Q9NSE4 1012 aaKnown RBP13.27□□□□□ -0.28
USP11-204ENST00000377107 THAP1Q9NVV9 213 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 SCN1AP35498 2009 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 HMX2A2RU54 273 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 SERPINB9P50453 376 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 TUBP50607 506 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 HIC1Q14526 733 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 TMPRSS6Q8IU80 811 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 ZNF567Q8N184 647 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 LPPQ93052 612 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 TNIP3Q96KP6 325 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 PLAC1Q9HBJ0 212 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 NDE1Q9NXR1 346 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 FETUBQ9UGM5 382 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 STAP1Q9ULZ2 295 aa13.27□□□□□ -0.28
USP11-204ENST00000377107 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 WDR81Q562E7 1941 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 CASTOR2A6NHX0 329 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 MDM4O15151 490 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 TREHO43280 583 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 AP1G2O75843 785 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 ENDOD1O94919 500 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 ALDOAP04075 364 aaKnown RBP13.27□□□□□ -0.29
USP11-204ENST00000377107 DHRS4L1P0CG22 281 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 ERCC2P18074 760 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 GNAZP19086 355 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 TCN1P20061 433 aaPredicted RBP13.27□□□□□ -0.29
USP11-204ENST00000377107 EFHC1Q5JVL4 640 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 ZNF534Q76KX8 674 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 ULK2Q8IYT8 1036 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
USP11-204ENST00000377107 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 GJD2Q9UKL4 321 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
USP11-204ENST00000377107 DNAJC25-GNG10A0A024R161 153 aa13.26□□□□□ -0.29
USP11-204ENST00000377107 GARSP41250 739 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms