RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 H3BRJ5 948 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 I6L893 689 aaPredicted RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 EEF2KO00418 725 aaKnown RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CREB3O43889 395 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 SRGAP2O75044 1071 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 KRT1P04264 644 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CYP17A1P05093 508 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ADH5P11766 374 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 SRFP11831 508 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 TCF4P15884 667 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CTNNA2P26232 953 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 SLC6A4P31645 630 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CTNNA1P35221 906 aaKnown RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CETN2P41208 172 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CDH6P55285 790 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 TPI1P60174 286 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 GAD2Q05329 585 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 DHCR24Q15392 516 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ANO4Q32M45 955 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ITPRIPL2Q3MIP1 535 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 PPP6R3Q5H9R7 873 aaPredicted RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ZNF569Q5MCW4 686 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 TRIM68Q6AZZ1 485 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 TPGS1Q6ZTW0 290 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CD101Q93033 1021 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ASIC4Q96FT7 647 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 BBS2Q9BXC9 721 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 RETREG1Q9H6L5 497 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 CATSPERBQ9H7T0 1116 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 ECT2Q9H8V3 914 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 GPATCH2LQ9NWQ4 482 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 MARK1Q9P0L2 795 aa13.6□□□□□ -0.23
TIMP1-202ENST00000377017 RCOR3Q9P2K3 495 aaPredicted RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
TIMP1-202ENST00000377017 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 TCAF2A6NFQ2 919 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 FGF10O15520 208 aaPredicted RBP13.59□□□□□ -0.23
TIMP1-202ENST00000377017 DAPK3O43293 454 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 TSPAN3O60637 253 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 LRIG2O94898 1065 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 ARSAP15289 507 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 GGCXP38435 758 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 RWDD2BP57060 319 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 C5orf22Q49AR2 442 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 TXNRD3NBQ6F5E7 133 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 RWDD4Q6NW29 188 aaKnown RBP13.59□□□□□ -0.23
TIMP1-202ENST00000377017 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 KATNAL2Q8IYT4 538 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 GJD3Q8N144 294 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 RBM41Q96IZ5 413 aaKnown RBP13.59□□□□□ -0.23
TIMP1-202ENST00000377017 XPO6Q96QU8 1125 aaKnown RBP13.59□□□□□ -0.23
TIMP1-202ENST00000377017 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
TIMP1-202ENST00000377017 ZYG11BQ9C0D3 744 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 HPS4Q9NQG7 708 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 SLC2A4RGQ9NR83 387 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 PCDHA3Q9Y5H8 950 aa13.59□□□□□ -0.23
TIMP1-202ENST00000377017 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.23
TIMP1-202ENST00000377017 XIRP2A4UGR9 3374 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 IGLV3-10A0A075B6K4 115 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 DRGXA6NNA5 263 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 ZNF487B1APH4 448 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 ARNTLO00327 626 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 GFRA2O00451 464 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 HOXC11O43248 304 aaPredicted RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 TBL1XO60907 577 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 CLDN11O75508 207 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 ZRANB2O95218 330 aaKnown RBP eCLIP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PENKP01210 267 aaPredicted RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 TYRP14679 529 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 EPHB2P29323 1055 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 HCAR3P49019 387 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 CDH4P55283 916 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 GNG11P61952 73 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 TNK2Q07912 1038 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 SEMA3BQ13214 749 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 CA9Q16790 459 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 MANEALQ5VSG8 457 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 RHBDF2Q6PJF5 856 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 CHST9Q7L1S5 443 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms