RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PCDH15Q96QU1 1955 aa21.85■■□□□ 1.09
VSX1-201ENST00000376707 KMT2BQ9UMN6 2715 aaPredicted RBP21.85■■□□□ 1.09
VSX1-201ENST00000376707 METTL12A8MUP2 240 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 CAPN9O14815 690 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 TOP3BO95985 862 aaKnown RBP21.84■■□□□ 1.09
VSX1-201ENST00000376707 CD59P13987 128 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 PI4KAP42356 2102 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 GRIK2Q13002 908 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 SLC14A1Q13336 389 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 NNTQ13423 1086 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 MEA1Q16626 185 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 NADSYN1Q6IA69 706 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 ENOSF1Q7L5Y1 443 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 CREBRFQ8IUR6 639 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 CCDC117Q8IWD4 279 aaPredicted RBP21.84■■□□□ 1.09
VSX1-201ENST00000376707 ADAM32Q8TC27 787 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 STK32AQ8WU08 396 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 PRICKLE1Q96MT3 831 aaPredicted RBP21.84■■□□□ 1.09
VSX1-201ENST00000376707 SCNM1Q9BWG6 230 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 ADAM33Q9BZ11 813 aa21.84■■□□□ 1.09
VSX1-201ENST00000376707 ASCC3Q8N3C0 2202 aaKnown RBP21.84■■□□□ 1.09
VSX1-201ENST00000376707 THAP12O43422 761 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 MOCS2O96007 188 aaPredicted RBP21.83■■□□□ 1.09
VSX1-201ENST00000376707 PROS1P07225 676 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 GNA15P30679 374 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 UNQ6494/PRO21346Q6UXR6 183 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 MLKLQ8NB16 471 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 FIBINQ8TAL6 211 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 ZNF606Q8WXB4 792 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 CRACR2AQ9BSW2 395 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 SLC4A5Q9BY07 1137 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 PCED1AQ9H1Q7 454 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 PRSS16Q9NQE7 514 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 SUN2Q9UH99 717 aa21.83■■□□□ 1.09
VSX1-201ENST00000376707 ADAMTS9Q9P2N4 1935 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 C1QTNF9BB2RNN3 333 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 BCAT2O15382 392 aaPredicted RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 APOEP02649 317 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 DNTTP04053 509 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 C1QTNF9P0C862 333 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 RDXP35241 583 aaKnown RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 ST8SIA6P61647 398 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 RPS24P62847 133 aaKnown RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 ZBTB16Q05516 673 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 CDH18Q13634 790 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 HNRNPDQ14103 355 aaKnown RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 SYPL2Q5VXT5 272 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 BEND5Q7L4P6 421 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 TAC4Q86UU9 113 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 IRF2BP1Q8IU81 584 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 CARNMT1Q8N4J0 409 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 SNX19Q92543 992 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 SLC39A13Q96H72 371 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 FAM81BQ96LP2 452 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 NUCKS1Q9H1E3 243 aaKnown RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 CLSTN2Q9H4D0 955 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 EIF2B4Q9UI10 523 aaKnown RBP21.82■■□□□ 1.08
VSX1-201ENST00000376707 CKAP5Q14008 2032 aa21.82■■□□□ 1.08
VSX1-201ENST00000376707 E5RJQ4 531 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 PAPSS1O43252 624 aaPredicted RBP21.81■■□□□ 1.08
VSX1-201ENST00000376707 GJB3O75712 270 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 USP8P40818 1118 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 RPS14P62263 151 aaKnown RBP21.81■■□□□ 1.08
VSX1-201ENST00000376707 MS4A13Q5J8X5 152 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 GJB7Q6PEY0 223 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 TRIM65Q6PJ69 517 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 MYEOVQ96EZ4 313 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 POPDC2Q9HBU9 364 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 ACP6Q9NPH0 428 aa21.81■■□□□ 1.08
VSX1-201ENST00000376707 CEP295Q9C0D2 2601 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 HYAL3O43820 417 aaPredicted RBP21.8■■□□□ 1.08
VSX1-201ENST00000376707 SH3BP5O60239 455 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 ASLP04424 464 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 ACSL1P33121 698 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 CSKP41240 450 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 YWHAZP63104 245 aaKnown RBP21.8■■□□□ 1.08
VSX1-201ENST00000376707 ARHGAP44Q17R89 818 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 TTC31Q49AM3 519 aaPredicted RBP21.8■■□□□ 1.08
VSX1-201ENST00000376707 ZNF776Q68DI1 518 aaPredicted RBP21.8■■□□□ 1.08
VSX1-201ENST00000376707 GBP6Q6ZN66 633 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 CLEC17AQ6ZS10 378 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 TMEM110Q86TL2 294 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 CFAP52Q8N1V2 620 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 TTC17Q96AE7 1141 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 LMLNQ96KR4 655 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 CAMK1GQ96NX5 476 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 BTBD1Q9H0C5 482 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 THAP9Q9H5L6 903 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 C6orf106Q9H6K1 298 aaPredicted RBP21.8■■□□□ 1.08
VSX1-201ENST00000376707 TJP2Q9UDY2 1190 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 CYTH4Q9UIA0 394 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 PCDHB9Q9Y5E1 797 aa21.8■■□□□ 1.08
VSX1-201ENST00000376707 MUC22E2RYF6 1773 aaPredicted RBP21.79■■□□□ 1.08
VSX1-201ENST00000376707 GTPBP10A4D1E9 387 aaKnown RBP21.79■■□□□ 1.08
VSX1-201ENST00000376707 H0Y626 953 aa21.79■■□□□ 1.08
VSX1-201ENST00000376707 TRIM16O95361 564 aa21.79■■□□□ 1.08
VSX1-201ENST00000376707 SEMA4FO95754 770 aa21.79■■□□□ 1.08
VSX1-201ENST00000376707 C7P10643 843 aa21.79■■□□□ 1.08
VSX1-201ENST00000376707 SLC9A1P19634 815 aa21.79■■□□□ 1.08
VSX1-201ENST00000376707 FAM193AP78312 1265 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms