RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC6-204ENST00000376643 USP24Q9UPU5 2620 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 CACNA1EQ15878 2313 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 FAM221BA6H8Z2 402 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 KCNJ18B7U540 433 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 FLRT2O43155 660 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 HYAL3O43820 417 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-204ENST00000376643 DFNA5O60443 496 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 SEMA4FO95754 770 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 AFPP02771 609 aaKnown RBP15.32■□□□□ 0.04
HDAC6-204ENST00000376643 BRD2P25440 801 aaKnown RBP15.32■□□□□ 0.04
HDAC6-204ENST00000376643 MAOBP27338 520 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 OXCT1P55809 520 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
HDAC6-204ENST00000376643 SNX16P57768 344 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 PAK1Q13153 545 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 TTI2Q6NXR4 508 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 USP30Q70CQ3 517 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 GLRX5Q86SX6 157 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 ADIPOR2Q86V24 386 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 EHBP1Q8NDI1 1231 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 FIBINQ8TAL6 211 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 ZCCHC14Q8WYQ9 949 aaKnown RBP15.32■□□□□ 0.04
HDAC6-204ENST00000376643 TFAP2BQ92481 460 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 P2RY11Q96G91 374 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 PPP1R9BQ96SB3 815 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 GAREM1Q9H706 876 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 CD93Q9NPY3 652 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 TJP2Q9UDY2 1190 aa15.32■□□□□ 0.04
HDAC6-204ENST00000376643 CKAP5Q14008 2032 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 PCNX2A6NKB5 2137 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 SH3BP5O60239 455 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 SLC2A3P11169 496 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 HLA-EP13747 358 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 GRIA4P48058 902 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 KCNH2Q12809 1159 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 ARID5BQ14865 1188 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 RNF219Q5W0B1 726 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-204ENST00000376643 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 RAB44Q7Z6P3 723 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-204ENST00000376643 CACUL1Q86Y37 369 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 TRIM59Q8IWR1 403 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 CYB5D2Q8WUJ1 264 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 ADAMTS14Q8WXS8 1223 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 TTC17Q96AE7 1141 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 TMEM121BQ9BXQ6 578 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-204ENST00000376643 PRSS16Q9NQE7 514 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 TM7SF3Q9NS93 570 aa15.31■□□□□ 0.04
HDAC6-204ENST00000376643 EIF2B4Q9UI10 523 aaKnown RBP15.31■□□□□ 0.04
HDAC6-204ENST00000376643 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-204ENST00000376643 SRPRAP08240 638 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 KRT5P13647 590 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 SPINK2P20155 84 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 CD27P26842 260 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 NNMTP40261 264 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 SLC12A1Q13621 1099 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 PTPRNQ16849 979 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 FAM133BQ5BKY9 247 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 TTC39BQ5VTQ0 682 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 ADAT2Q7Z6V5 191 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 FAM124AQ86V42 546 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 DQX1Q8TE96 717 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 GANCQ8TET4 914 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 SETD7Q8WTS6 366 aaKnown RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 MIS12Q9H081 205 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 POPDC2Q9HBU9 364 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 TMEM51Q9NW97 253 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 KIAA1522Q9P206 1035 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-204ENST00000376643 CNTN6Q9UQ52 1028 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
HDAC6-204ENST00000376643 TARSL2A2RTX5 802 aaKnown RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 FTH1P19P0C7X4 201 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 GPD2P43304 727 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 RPS14P62263 151 aaKnown RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 SULT2A1Q06520 285 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 MORC3Q14149 939 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 HLA-BQ31612 363 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 HNRNPA1L2Q32P51 320 aaKnown RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 MS4A13Q5J8X5 152 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 ATP6V0D2Q8N8Y2 350 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 OR2I1PQ8NGU4 316 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 ERCC4Q92889 916 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 IGSF8Q969P0 613 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 FCRL2Q96LA5 508 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 NOX5Q96PH1 765 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 RSPH9Q9H1X1 276 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-204ENST00000376643 STIM2Q9P246 746 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 KLK13Q9UKR3 277 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 PCOLCE2Q9UKZ9 415 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 FZD4Q9ULV1 537 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms