RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 LAMP2P13473 410 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 GBP2P32456 591 aaPredicted RBP23.68■■□□□ 1.38
HLA-C-202ENST00000376237 CHKAP35790 457 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 TPI1P60174 286 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 TFDP2Q14188 446 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 MANEALQ5VSG8 457 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 RAP1GAP2Q684P5 730 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 NADSYN1Q6IA69 706 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 RFX8Q6ZV50 586 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 MYADMQ96S97 322 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 RETREG1Q9H6L5 497 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 PPARGC1AQ9UBK2 798 aaKnown RBP23.68■■□□□ 1.38
HLA-C-202ENST00000376237 E9PAM4 449 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 F5H5T6 163 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 SLC9A3R1O14745 358 aaPredicted RBP23.67■■□□□ 1.38
HLA-C-202ENST00000376237 DAPK3O43293 454 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 MBTPS2O43462 519 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 TJP3O95049 919 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 GOT1P17174 413 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 TACR2P21452 398 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 PAFAH1B1P43034 410 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 FAM133BQ5BKY9 247 aaKnown RBP23.67■■□□□ 1.38
HLA-C-202ENST00000376237 ANKRD20A8PQ5CZ79 823 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 CCDC181Q5TID7 509 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 CREG2Q8IUH2 290 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 FAM217AQ8IXS0 508 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 CPXM2Q8N436 756 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 TTC16Q8NEE8 873 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.67■■□□□ 1.38
HLA-C-202ENST00000376237 MAIP1Q8WWC4 291 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 OTUB2Q96DC9 234 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 TBC1D31Q96DN5 1066 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 ZFP14Q9HCL3 533 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 DONSONQ9NYP3 566 aa23.67■■□□□ 1.38
HLA-C-202ENST00000376237 IGLV3-10A0A075B6K4 115 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 GRXCR2A6NFK2 248 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 PGRMC1O00264 195 aaKnown RBP23.66■■□□□ 1.38
HLA-C-202ENST00000376237 ZNF185O15231 689 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 ZFXP17010 805 aaPredicted RBP23.66■■□□□ 1.38
HLA-C-202ENST00000376237 EPHB2P29323 1055 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 HOXC13P31276 330 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 MMRN1Q13201 1228 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 C5orf22Q49AR2 442 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 FBXL22Q6P050 247 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 AADACL2Q6P093 401 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 SLC13A5Q86YT5 568 aaPredicted RBP23.66■■□□□ 1.38
HLA-C-202ENST00000376237 ZNF683Q8IZ20 524 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 CATSPERBQ9H7T0 1116 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 VANGL2Q9ULK5 521 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 SNX10Q9Y5X0 201 aa23.66■■□□□ 1.38
HLA-C-202ENST00000376237 DRGXA6NNA5 263 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 FGF10O15520 208 aaPredicted RBP23.65■■□□□ 1.38
HLA-C-202ENST00000376237 FGGP02679 453 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 GGCXP38435 758 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 WHAMMP3Q1A5X7 153 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 RABGAP1LQ5R372 815 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 BBS7Q8IWZ6 715 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 PCDH19Q8TAB3 1148 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 BPIFB1Q8TDL5 484 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 MRFAP1Q9Y605 127 aa23.65■■□□□ 1.38
HLA-C-202ENST00000376237 GOLGA6L7A0A1B0GV03 622 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 KRT10P13645 584 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 DPYSQ14117 519 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 LONRF2Q1L5Z9 754 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 LEXMQ3ZCV2 418 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 TTC39BQ5VTQ0 682 aaPredicted RBP23.64■■□□□ 1.38
HLA-C-202ENST00000376237 KAZNQ674X7 775 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 RWDD4Q6NW29 188 aaKnown RBP23.64■■□□□ 1.38
HLA-C-202ENST00000376237 ANKS1BQ7Z6G8 1248 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 C14orf80Q86SX3 495 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 RFX6Q8HWS3 928 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 LGI2Q8N0V4 545 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 MS4A14Q96JA4 679 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 CAPZA3Q96KX2 299 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 RPRD1AQ96P16 312 aaPredicted RBP23.64■■□□□ 1.38
HLA-C-202ENST00000376237 HEMGNQ9BXL5 484 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 ZYG11BQ9C0D3 744 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 ARHGEF4Q9NR80 690 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 EPS15L1Q9UBC2 864 aa23.64■■□□□ 1.38
HLA-C-202ENST00000376237 SLC6A4P31645 630 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 VIPR2P41587 438 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 PUS10Q3MIT2 529 aaKnown RBP23.64■■□□□ 1.37
HLA-C-202ENST00000376237 SLC9A4Q6AI14 798 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 BBS12Q6ZW61 710 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 MTSS1LQ765P7 747 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 RIN3Q8TB24 985 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 ELSPBP1Q96BH3 223 aa23.64■■□□□ 1.37
HLA-C-202ENST00000376237 THG1LQ9NWX6 298 aaKnown RBP23.64■■□□□ 1.37
HLA-C-202ENST00000376237 SZT2Q5T011 3432 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 TYW5A2RUC4 315 aaKnown RBP23.63■■□□□ 1.37
HLA-C-202ENST00000376237 HEPACAM2A8MVW5 462 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 APOL1O14791 398 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 CST8O60676 142 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 RHOQP17081 205 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 ERCC2P18074 760 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 FCARP24071 287 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 CKAP4Q07065 602 aaKnown RBP23.63■■□□□ 1.37
HLA-C-202ENST00000376237 KLF1Q13351 362 aaPredicted RBP23.63■■□□□ 1.37
HLA-C-202ENST00000376237 ARTNQ5T4W7 220 aa23.63■■□□□ 1.37
HLA-C-202ENST00000376237 NEU3Q9UQ49 428 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms