RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ACSL1P33121 698 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 FMO5P49326 533 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 ST8SIA6P61647 398 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 RPS14P62263 151 aaKnown RBP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 BNC1Q01954 994 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 ZNF776Q68DI1 518 aaPredicted RBP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 USP30Q70CQ3 517 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 CCDC117Q8IWD4 279 aaPredicted RBP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 KDM1BQ8NB78 822 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 HJURPQ8NCD3 748 aaPredicted RBP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 SMARCE1Q969G3 411 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 CEP63Q96MT8 703 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 C6orf106Q9H6K1 298 aaPredicted RBP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 IL21RQ9HBE5 538 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.13■■□□□ 1.45
C9orf47-202ENST00000375850 NCKAP1Q9Y2A7 1128 aa24.13■■□□□ 1.45
C9orf47-202ENST00000375850 AKAP13Q12802 2813 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 A0A1B0GVT2 93 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 ACSL4O60488 711 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 LTFP02788 710 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 CD27P26842 260 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 TBX4P57082 545 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 SCAPQ12770 1279 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 LRMPQ12912 555 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 NNTQ13423 1086 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 LRSAM1Q6UWE0 723 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 RHBDD1Q8TEB9 315 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 SERPINB11Q96P15 392 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 TRIM62Q9BVG3 475 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 LHX6Q9UPM6 363 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 PCDHB4Q9Y5E5 795 aa24.12■■□□□ 1.45
C9orf47-202ENST00000375850 PKD1L2Q7Z442 2459 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 DFNA5O60443 496 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 TBL1XO60907 577 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 RNASEH1O60930 286 aaKnown RBP24.11■■□□□ 1.45
C9orf47-202ENST00000375850 CSNK1EP49674 416 aaKnown RBP24.11■■□□□ 1.45
C9orf47-202ENST00000375850 PMS1P54277 932 aaKnown RBP24.11■■□□□ 1.45
C9orf47-202ENST00000375850 INAVAQ3KP66 663 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 PMF1Q6P1K2 205 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 MFN1Q8IWA4 741 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 PNPLA1Q8N8W4 532 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 FIBINQ8TAL6 211 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 IGSF8Q969P0 613 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 TTC17Q96AE7 1141 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 DHTKD1Q96HY7 919 aaPredicted RBP24.11■■□□□ 1.45
C9orf47-202ENST00000375850 TIGD1Q96MW7 591 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 CCDC86Q9H6F5 360 aaKnown RBP24.11■■□□□ 1.45
C9orf47-202ENST00000375850 TM9SF3Q9HD45 589 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 ANKRD6Q9Y2G4 727 aa24.11■■□□□ 1.45
C9orf47-202ENST00000375850 SPEGQ15772 3267 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 M0QYV0 167 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 PCDHGA12O60330 932 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 ARID5BQ14865 1188 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 KIF19Q2TAC6 998 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 FAM133BQ5BKY9 247 aaKnown RBP24.1■■□□□ 1.45
C9orf47-202ENST00000375850 FOXR2Q6PJQ5 311 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 SLCO6A1Q86UG4 719 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 PPM1KQ8N3J5 372 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 TFAP2BQ92481 460 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 BIRC7Q96CA5 298 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 RSPH9Q9H1X1 276 aaPredicted RBP24.1■■□□□ 1.45
C9orf47-202ENST00000375850 GDPD2Q9HCC8 539 aa24.1■■□□□ 1.45
C9orf47-202ENST00000375850 TPX2Q9ULW0 747 aaKnown RBP24.1■■□□□ 1.45
C9orf47-202ENST00000375850 DKK1O94907 266 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 CD70P32970 193 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 GRK6P43250 576 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 RGS7P49802 495 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 CCT8P50990 548 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 GCNT1Q02742 428 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 RFWD3Q6PCD5 774 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 BEND5Q7L4P6 421 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 TMPRSS7Q7RTY8 843 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 GALNT15Q8N3T1 639 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 ZNF366Q8N895 744 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 SKA1Q96BD8 255 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 TLR6Q9Y2C9 796 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 CACNA1GO43497 2377 aa24.09■■□□□ 1.45
C9orf47-202ENST00000375850 TRIM49BA6NDI0 452 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 TAF4O00268 1085 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 PAPSS1O43252 624 aaPredicted RBP24.08■■□□□ 1.45
C9orf47-202ENST00000375850 MOCS3O95396 460 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 SLC6A4P31645 630 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 SGSHP51688 502 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 HNRNPA1L2Q32P51 320 aaKnown RBP24.08■■□□□ 1.45
C9orf47-202ENST00000375850 CCDC40Q4G0X9 1142 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 ELOA2Q8IYF1 753 aaPredicted RBP24.08■■□□□ 1.45
C9orf47-202ENST00000375850 PABPC3Q9H361 631 aaKnown RBP24.08■■□□□ 1.45
C9orf47-202ENST00000375850 DKK4Q9UBT3 224 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 SNX11Q9Y5W9 270 aa24.08■■□□□ 1.45
C9orf47-202ENST00000375850 MUC22E2RYF6 1773 aaPredicted RBP24.07■■□□□ 1.44
C9orf47-202ENST00000375850 TNFSF14O43557 240 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 FSBPO95073 299 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 ACADSBP45954 432 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 RACK1P63244 317 aaKnown RBP24.07■■□□□ 1.44
C9orf47-202ENST00000375850 CDH18Q13634 790 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 MEA1Q16626 185 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 KIAA0895LQ68EN5 471 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 ADAT2Q7Z6V5 191 aaKnown RBP24.07■■□□□ 1.44
C9orf47-202ENST00000375850 WFDC5Q8TCV5 224 aa24.07■■□□□ 1.44
C9orf47-202ENST00000375850 LMLNQ96KR4 655 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms