RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 THP07101 528 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 POU1F1P28069 291 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 PSEN2P49810 448 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 BMPR2Q13873 1038 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 HYIQ5T013 277 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM45BPQ6NSW5 357 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 PRMT9Q6P2P2 845 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 CYP4Z1Q86W10 505 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 C4orf32Q8N8J7 132 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 PRRG3Q9BZD7 231 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 ROGDIQ9GZN7 287 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MYRFQ9Y2G1 1151 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MROH7Q68CQ1 1323 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SERPINE1P05121 402 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 ATP5BP06576 529 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MGAT5Q09328 741 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 DDX39BQ13838 428 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 C2CD6Q53TS8 623 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 TIGD7Q6NT04 549 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC22A9Q8IVM8 553 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MIER2Q8N344 545 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 FLCNQ8NFG4 579 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 BDH2Q9BUT1 245 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 CEP44Q9C0F1 390 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 NCF1BA6NI72 391 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 NCF1CA8MVU1 366 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 NCF1P14598 390 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 RAG1P15918 1043 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 CHI3L1P36222 383 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 PBX1P40424 430 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 RAB27AP51159 221 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 VAC14Q08AM6 782 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM98BQ52LJ0 330 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 CLVS1Q8IUQ0 354 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 ATP6V0D2Q8N8Y2 350 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 AENQ8WTP8 325 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM237Q96Q45 408 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 STARD7Q9NQZ5 370 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 UTP6Q9NYH9 597 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 UBAP1Q9NZ09 502 aa12.56□□□□□ -0.4
NPLOC4-202ENST00000374747 MYH8P13535 1937 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PHGDHO43175 533 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC1A6P48664 564 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 GTF2BQ00403 316 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PRKAA1Q13131 559 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PRCCQ92733 491 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 LRRC39Q96DD0 335 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM120BQ96EK7 910 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 DCUN1D5Q9BTE7 237 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SAR1AQ9NR31 198 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 DSEQ9UL01 958 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 COL1A1P02452 1464 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 CYB561D2O14569 222 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 CLOCKO15516 846 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 MPOP05164 745 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 CENPAP49450 140 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SERPINH1P50454 418 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 CSE1LP55060 971 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 C21orf59P57076 290 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 CDC16Q13042 620 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC9A5Q14940 896 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM172AQ8WUF8 416 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 DNAJB3Q8WWF6 145 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 APOPT1Q96IL0 206 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 GANQ9H2C0 597 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 GPAMQ9HCL2 828 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM191CA6NGB0 347 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PEX1O43933 1283 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 IRF1P10914 325 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 PLPPR4Q7Z2D5 763 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 ACOT1Q86TX2 421 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 DHFR2Q86XF0 187 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 OR6Y1Q8NGX8 325 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 MTMR8Q96EF0 704 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM176AQ96HP8 235 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 DEPDC7Q96QD5 511 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 ZNF184Q99676 751 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 OLFM1Q99784 485 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 SYT17Q9BSW7 474 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 THAP1Q9NVV9 213 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 USP18Q9UMW8 372 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM20BO75063 409 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 RPS7P62081 194 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 INAQ16352 499 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 MGAT5BQ3V5L5 792 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms