RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 MAGEA6P43360 314 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 GLUD2P49448 558 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 GPX6P59796 221 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 DUSP4Q13115 394 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 USP41Q3LFD5 358 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 MSANTD2Q6P1R3 559 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 ANKLE1Q8NAG6 615 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 FBXO22Q8NEZ5 403 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 IGSF21Q96ID5 467 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
PTPN20-203ENST00000374342 OSBPL2Q9H1P3 480 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 SLC12A6Q9UHW9 1150 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 RAD54BQ9Y620 910 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 NUP205Q92621 2012 aa17.4■□□□□ 0.38
PTPN20-203ENST00000374342 WDR27A2RRH5 827 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 C2CD2LO14523 706 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 PHBP35232 272 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 MDH1P40925 334 aaKnown RBP17.39■□□□□ 0.37
PTPN20-203ENST00000374342 DEFB103AP81534 67 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 SMARCB1Q12824 385 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 C2orf15Q8WU43 125 aaKnown RBP17.39■□□□□ 0.37
PTPN20-203ENST00000374342 MTRRQ9UBK8 725 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 TBK1Q9UHD2 729 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 NEU3Q9UQ49 428 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 NYNRINQ9P2P1 1898 aaKnown RBP17.39■□□□□ 0.37
PTPN20-203ENST00000374342 POC1B-GALNT4F8VUJ3 575 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 CDH16O75309 829 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 AVILO75366 819 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 ITGB8P26012 769 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 ATP5DP30049 168 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 SSTR1P30872 391 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 ELK3P41970 407 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 IRAK1P51617 712 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 EFEMP1Q12805 493 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 PPP2R5DQ14738 602 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 TMED2Q15363 201 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 TNFAIP8L3Q5GJ75 292 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 KIAA1841Q6NSI8 718 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 PALM2Q8IXS6 379 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 GIPC2Q8TF65 315 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 HAPLN3Q96S86 360 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 IL37Q9NZH6 218 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 LGALS13Q9UHV8 139 aa17.39■□□□□ 0.37
PTPN20-203ENST00000374342 ZMYND8Q9ULU4 1186 aaPredicted RBP17.39■□□□□ 0.37
PTPN20-203ENST00000374342 ABHD14A-ACY1A0A1B0GW23 586 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 OPHN1O60890 802 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 EFEMP2O95967 443 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 CSF2RAP15509 400 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TPSB2P20231 275 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 RPL10AP62906 217 aaKnown RBP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TAF10Q12962 218 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 SEMA5AQ13591 1074 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TPSAB1Q15661 275 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TAOK1Q7L7X3 1001 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 SPATA17Q96L03 361 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 FRMD8Q9BZ67 464 aaPredicted RBP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 CNOT10Q9H9A5 744 aaKnown RBP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TLR8Q9NR97 1041 aaKnown RBP17.38■□□□□ 0.37
PTPN20-203ENST00000374342 TLR6Q9Y2C9 796 aa17.38■□□□□ 0.37
PTPN20-203ENST00000374342 FAM92AA1XBS5 289 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 KCNK1O00180 336 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 NCAM2O15394 837 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 ATF6P18850 670 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 OR1D2P34982 312 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 FDFT1P37268 417 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TBX4P57082 545 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 PPIDQ08752 370 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 GALNT2Q10471 571 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 WASHC5Q12768 1159 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 SLC8B1Q6J4K2 584 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 ZNF567Q8N184 647 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TOP1MTQ969P6 601 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TBC1D31Q96DN5 1066 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MRRFQ96E11 262 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 CFAP36Q96G28 342 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 FCRL2Q96LA5 508 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 ZNF558Q96NG5 402 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MAGED2Q9UNF1 606 aaPredicted RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TRIM43BA6NCK2 446 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 A6NNZ2 444 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 FOXO6A8MYZ6 492 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TIMP1P01033 207 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MX2P20592 715 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 PSMB4P28070 264 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 GCAP28676 217 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MMP13P45452 471 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 WDR5P61964 334 aaKnown RBP17.37■□□□□ 0.37
PTPN20-203ENST00000374342 TUBB8Q3ZCM7 444 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 C10orf120Q5SQS8 335 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 MANEALQ5VSG8 457 aa17.37■□□□□ 0.37
PTPN20-203ENST00000374342 CAND1Q86VP6 1230 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms