RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 GABRB2P47870 512 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 PKNOX1P55347 436 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 GPR107Q5VW38 600 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ENOSF1Q7L5Y1 443 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 POMGNT1Q8WZA1 660 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 FRMD8Q9BZ67 464 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 SEMA6AQ9H2E6 1030 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 PTBP2Q9UKA9 531 aaKnown RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ERBB2P04626 1255 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 SERPINE1P05121 402 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 PRKCHP24723 683 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 MCCD1P59942 119 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 NOMO3P69849 1222 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 GCNT1Q02742 428 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 DMPKQ09013 629 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 GALNT2Q10471 571 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ABCB5Q2M3G0 1257 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 TERB1Q8NA31 727 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 FAM47BQ8NA70 645 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 NPLQ9BXD5 320 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 CDH19Q9H159 772 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 VPS33BQ9H267 617 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 TOPORSQ9NS56 1045 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 SACM1LQ9NTJ5 587 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 RIC8BQ9NVN3 520 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 WRAP73Q9P2S5 460 aaPredicted RBP13.25□□□□□ -0.29
PRPF4-201ENST00000374198 KLHL3Q9UH77 587 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 VPS51Q9UID3 782 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 ERVK-11Q9UQG0 969 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 HMX2A2RU54 273 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 F8VP50 259 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 G3V3G9 751 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SNAP91O60641 907 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 ENTPD3O75355 529 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 CD1EP15812 388 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 KCNA4P22459 653 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 ME2P23368 584 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TTKP33981 857 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF76P36508 570 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 EIF3EP60228 445 aaKnown RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TRPC3Q13507 836 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 OXA1LQ15070 435 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 PHF13Q86YI8 300 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 RNF148Q8N7C7 305 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 HPS1Q92902 700 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 PSD2Q9BQI7 771 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 PI4K2AQ9BTU6 479 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 FRMD8P1Q9BZ68 369 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 FZD9O00144 591 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 ACOT8O14734 319 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 KLHL41O60662 606 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 TMEM191BP0C7N4 346 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■□ 24
PRPF4-201ENST00000374198 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 VASH1Q7L8A9 365 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 CADM3Q8N126 398 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SLC4A5Q9BY07 1137 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 SIAEQ9HAT2 523 aa13.24□□□□□ -0.29
PRPF4-201ENST00000374198 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CFLARO15519 480 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 HTRA2O43464 458 aaPredicted RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CSH1P0DML2 217 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CSH2P0DML3 217 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 TCEA1P23193 301 aaKnown RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ARRB2P32121 409 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 SERPINB5P36952 375 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 CCT8P50990 548 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 GNA12Q03113 381 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 PMS2P3Q13401 168 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 LSM12Q3MHD2 195 aaKnown RBP13.23□□□□□ -0.29
PRPF4-201ENST00000374198 TMEM26Q6ZUK4 368 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
PRPF4-201ENST00000374198 ACDQ96AP0 544 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms