RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 ITGA2BP08514 1039 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 HOXC6P09630 235 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 LCP1P13796 627 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 CPA3P15088 417 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PRKCHP24723 683 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 IRF9Q00978 393 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SLC10A2Q12908 348 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 LY6KQ17RY6 165 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 KLHDC10Q6PID8 442 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PACS1Q6VY07 963 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ACOT1Q86TX2 421 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 RTKN2Q8IZC4 609 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 DNAAF3Q8N9W5 541 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 BHLHE22Q8NFJ8 381 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 NDRG1Q92597 394 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SGF29Q96ES7 293 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 EFR3BQ9Y2G0 817 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 HES2Q9Y543 173 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 STYXL1Q9Y6J8 313 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ADGRA2Q96PE1 1338 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 KCNK1O00180 336 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 HCRTO43612 131 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 MT-CO1P00395 513 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 XRCC1P18887 633 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ARL2P36404 184 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ABCE1P61221 599 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 CCDC14Q49A88 953 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 JADE1Q6IE81 842 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 LAYNQ6UX15 382 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 KYAT3Q6YP21 454 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 FAM131BQ86XD5 332 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 C1orf127Q8N9H9 656 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 LPAR1Q92633 364 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 FAM149B1Q96BN6 582 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 RCN3Q96D15 328 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 NRBP2Q9NSY0 501 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 UBP1Q9NZI7 540 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 AFG3L2Q9Y4W6 797 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 H3BSA7 217 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TRDMT1O14717 391 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 MSCO60682 206 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 GLRA3O75311 464 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 CRTAMO95727 393 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 C1QAP02745 245 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PABPC4LP0CB38 370 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 IL4RP24394 825 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 MPSTP25325 297 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 GPD2P43304 727 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 GABRB2P47870 512 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 THOP1P52888 689 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PRAMEP78395 509 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 KLF10Q13118 480 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ART3Q13508 389 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TUBB3Q13509 450 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TMEM132BQ14DG7 1078 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 STILQ15468 1287 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TBCCQ15814 346 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 AAGABQ6PD74 315 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 FAM83AQ86UY5 434 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SESTD1Q86VW0 696 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PQLC1Q8N2U9 271 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TRIML2Q8N7C3 387 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 CCNYL1Q8N7R7 359 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TDRD5Q8NAT2 981 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 COLGALT1Q8NBJ5 622 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 AGAP2Q99490 1192 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 C20orf96Q9NUD7 363 aaPredicted RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 TDRKHQ9Y2W6 561 aaKnown RBP10.03□□□□□ -0.8
CSMD2-203ENST00000373377 PCDHA11Q9Y5I1 949 aa10.03□□□□□ -0.8
CSMD2-203ENST00000373377 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.8
CSMD2-203ENST00000373377 LACTBL1A8MY62 500 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.81
CSMD2-203ENST00000373377 ASLP04424 464 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 HNRNPCP07910 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
CSMD2-203ENST00000373377 DPEP1P16444 411 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 TPH1P17752 444 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 RPL10P27635 214 aaKnown RBP10.02□□□□□ -0.81
CSMD2-203ENST00000373377 ADORA2BP29275 332 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 HDAC4P56524 1084 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 STXBP2Q15833 593 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 MAP3K21Q5TCX8 1036 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 FAM219BQ5XKK7 198 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 PMF1Q6P1K2 205 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 NAPRTQ6XQN6 538 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 METTL25Q8N6Q8 603 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 UBR7Q8N806 425 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 ZNF669Q96BR6 464 aaPredicted RBP10.02□□□□□ -0.81
CSMD2-203ENST00000373377 KCNK16Q96T55 309 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 SORT1Q99523 831 aa10.02□□□□□ -0.81
CSMD2-203ENST00000373377 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms