RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 AMHP03971 560 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 CSH1P0DML2 217 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 CSH2P0DML3 217 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 CCNB1P14635 433 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 ADORA2BP29275 332 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 GABRB2P47870 512 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 TAP1Q03518 808 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 SOWAHAQ2M3V2 549 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 CCDC92Q53HC0 331 aaPredicted RBP6.6□□□□□ -1.35
CHD6-202ENST00000373222 MDH1BQ5I0G3 518 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 LHFPL2Q6ZUX7 228 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 NLRP9Q7RTR0 991 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 PDIK1LQ8N165 341 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 CCDC185Q8N715 623 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 FBXO27Q8NI29 283 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 N4BP2L2Q92802 583 aaPredicted RBP6.6□□□□□ -1.35
CHD6-202ENST00000373222 RNF157Q96PX1 679 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 MIPEPQ99797 713 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 YIPF4Q9BSR8 244 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 SARGQ9BW04 601 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 C20orf27Q9GZN8 174 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
CHD6-202ENST00000373222 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 ERAP1Q9NZ08 941 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 MARCOQ9UEW3 520 aaPredicted RBP6.6□□□□□ -1.35
CHD6-202ENST00000373222 BARX2Q9UMQ3 279 aaPredicted RBP6.6□□□□□ -1.35
CHD6-202ENST00000373222 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 GPSM3Q9Y4H4 160 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 TTLL3Q9Y4R7 772 aa6.6□□□□□ -1.35
CHD6-202ENST00000373222 HMX2A2RU54 273 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 A6NCN8 305 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ST8SIA5O15466 376 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 MAGEB2O15479 319 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 PRPSAP2O60256 369 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 LPXNO60711 386 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ENDOD1O94919 500 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 LCP1P13796 627 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 HOXA11P31270 313 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 CPA2P48052 419 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 GTF2A2P52657 109 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 GSCP56915 257 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 KRT81Q14533 505 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CTC1Q2NKJ3 1217 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 HSF5Q4G112 596 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 PRAMEF19Q5SWL8 479 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 MTHFD1LQ6UB35 978 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZCCHC23Q6ZST2 131 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 RFX8Q6ZV50 586 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 SH2D5Q6ZV89 423 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZNF534Q76KX8 674 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ANKRD23Q86SG2 305 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ERO1BQ86YB8 467 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 RIBC1Q8N443 379 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TMEM40Q8WWA1 233 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 NELL1Q92832 810 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZNF570Q96NI8 536 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 OSMRQ99650 979 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CNPY3Q9BT09 278 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TBC1D10AQ9BXI6 508 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 KCNK13Q9HB14 408 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ARL8BQ9NVJ2 186 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 PRMT7Q9NVM4 692 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 RNF181Q9P0P0 153 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 SLC24A2Q9UI40 661 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 PDCD11Q14690 1871 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 FAM237BA0A1B0GVD1 139 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 A0A1W2PRQ8 180 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 A0A1W2PRU2 124 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TRIM49D1C9J1S8 452 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 IL18RAPO95256 599 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 KITP10721 976 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ALADP13716 330 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ETV4P43268 484 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 PGGT1BP53609 377 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 MRPS5P82675 430 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZNF200P98182 395 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ACVR2BQ13705 512 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 SURF1Q15526 300 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 MROH9Q5TGP6 573 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CFAP161Q6P656 301 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CES3Q6UWW8 571 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ATG14Q6ZNE5 492 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 CLNKQ7Z7G1 428 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ALYREFQ86V81 257 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 SYNPOQ8N3V7 929 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 FAM13CQ8NE31 585 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ZNF296Q8WUU4 475 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms