RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ABL2P42684 1182 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 MAGEA12P43365 314 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 AQP5P55064 265 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 LILRA4P59901 499 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 CRADDP78560 199 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SEMA3BQ13214 749 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 IRF5Q13568 498 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 KPNB1Q14974 876 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TEDDM1Q5T9Z0 273 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ZNF567Q8N184 647 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 NDRG1Q92597 394 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 NTAN1Q96AB6 310 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ZNF778Q96MU6 729 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PRDM12Q9H4Q4 367 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TMPRSS4Q9NRS4 437 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SYBUQ9NX95 663 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 STAP1Q9ULZ2 295 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PLA2G4CQ9UP65 541 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PSAT1Q9Y617 370 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 HAS3O00219 553 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 GABRDO14764 452 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 BEST1O76090 585 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SERPINA6P08185 405 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ATP6V1C1P21283 382 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 AIF1P55008 147 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 AP1B1Q10567 949 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SCAPQ12770 1279 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TUBB3Q13509 450 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 BLMHQ13867 455 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PCLAFQ15004 111 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 CCL15Q16663 113 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 INSCQ1MX18 579 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 FASTKD1Q53R41 847 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 CLEC20AQ6ZU45 233 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 RFX8Q6ZV50 586 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TMPRSS6Q8IU80 811 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ARHGAP24Q8N264 748 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 WNT8BQ93098 351 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 FERMT1Q9BQL6 677 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 GORASP1Q9BQQ3 440 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
TSPAN6-201ENST00000373020 C9IYK1 514 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 F5H423 210 aaPredicted RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 ITGA2BP08514 1039 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 ACADSP16219 412 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 GTF2A2P52657 109 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 GJA9P57773 515 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 FAM110CQ1W6H9 321 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 WDR60Q8WVS4 1066 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 DNAJB3Q8WWF6 145 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PIGVQ9NUD9 493 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 MARCOQ9UEW3 520 aaPredicted RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 IPPQ9Y573 584 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 RAD54BQ9Y620 910 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 TRIP12Q14669 1992 aaPredicted RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 M0QYT0 321 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 EEF2KO00418 725 aaKnown RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 CLDN5O00501 218 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PTGESO14684 152 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 KRT36O76013 467 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PSMG1O95456 288 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PROCP04070 461 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 FYNP06241 537 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 MFSD10Q14728 455 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 RCN1Q15293 331 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 SPANXN3Q5MJ09 141 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 SYPL2Q5VXT5 272 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 RBM15BQ8NDT2 890 aaKnown RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 WDR6Q9NNW5 1121 aaKnown RBP12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 DCDC2Q9UHG0 476 aa12.89□□□□□ -0.35
TSPAN6-201ENST00000373020 SCN4AP35499 1836 aa12.88□□□□□ -0.35
TSPAN6-201ENST00000373020 B2RBV5 119 aa12.88□□□□□ -0.35
TSPAN6-201ENST00000373020 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
TSPAN6-201ENST00000373020 ITM2AO43736 263 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms