RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 XPO6Q96QU8 1125 aaKnown RBP25.74■■□□□ 1.71
CTSA-203ENST00000372459 HAPLN3Q96S86 360 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 BRD8Q9H0E9 1235 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 NMUR1Q9HB89 426 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 SFMBT1Q9UHJ3 866 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 SNX10Q9Y5X0 201 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 NR2E3Q9Y5X4 410 aa25.74■■□□□ 1.71
CTSA-203ENST00000372459 NT5C1B-RDH14C9J2C7 533 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 H7C4K7 107 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 AVILO75366 819 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 MX2P20592 715 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 PGFP49763 221 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 ARPP19P56211 112 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 TLE2Q04725 743 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 SMARCB1Q12824 385 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 TRIM60Q495X7 471 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 CAND1Q86VP6 1230 aaKnown RBP25.73■■□□□ 1.71
CTSA-203ENST00000372459 IGDCC3Q8IVU1 814 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 COLGALT1Q8NBJ5 622 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 PSMC3IPQ9P2W1 217 aaPredicted RBP25.73■■□□□ 1.71
CTSA-203ENST00000372459 GMNCA6NCL1 334 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 SEC24CP53992 1094 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 SARNPP82979 210 aaKnown RBP25.73■■□□□ 1.71
CTSA-203ENST00000372459 NLRP14Q86W24 1093 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 SPPL2BQ8TCT7 592 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 LRRC39Q96DD0 335 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 SERPINB11Q96P15 392 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 OXCT2Q9BYC2 517 aaPredicted RBP25.73■■□□□ 1.71
CTSA-203ENST00000372459 SEPT10Q9P0V9 454 aa25.73■■□□□ 1.71
CTSA-203ENST00000372459 RASA4BC9J798 803 aa25.72■■□□□ 1.71
CTSA-203ENST00000372459 RASA4O43374 803 aa25.72■■□□□ 1.71
CTSA-203ENST00000372459 GPR17Q13304 367 aa25.72■■□□□ 1.71
CTSA-203ENST00000372459 PPP2R5DQ14738 602 aa25.72■■□□□ 1.71
CTSA-203ENST00000372459 ANKS3Q6ZW76 656 aa25.72■■□□□ 1.71
CTSA-203ENST00000372459 SRRM1Q8IYB3 904 aaKnown RBP25.72■■□□□ 1.71
CTSA-203ENST00000372459 FNDC1Q4ZHG4 1894 aaPredicted RBP25.72■■□□□ 1.71
CTSA-203ENST00000372459 TMEM120BA0PK00 339 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 BRAFP15056 766 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 PBX3P40426 434 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 MNX1P50219 401 aaPredicted RBP25.71■■□□□ 1.71
CTSA-203ENST00000372459 CDK16Q00536 496 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 RTP2Q5QGT7 225 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 TP53INP2Q8IXH6 220 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 NPWQ8N729 165 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 STKLD1Q8NE28 680 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 ATXN2LQ8WWM7 1075 aaKnown RBP25.71■■□□□ 1.71
CTSA-203ENST00000372459 TTPALQ9BTX7 342 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 CRISPLD2Q9H0B8 497 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 XAB2Q9HCS7 855 aaKnown RBP25.71■■□□□ 1.71
CTSA-203ENST00000372459 PLXNA3P51805 1871 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 MTMR11A4FU01 709 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 MSI1O43347 362 aaKnown RBP25.71■■□□□ 1.71
CTSA-203ENST00000372459 TBC1D4O60343 1298 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 CREB1P16220 341 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 HTR7P34969 479 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 PPIDQ08752 370 aaKnown RBP25.71■■□□□ 1.71
CTSA-203ENST00000372459 WASHC5Q12768 1159 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 PARP6Q2NL67 630 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 CYTH2Q99418 400 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 KCNK9Q9NPC2 374 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 OSER1Q9NX31 292 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 IL37Q9NZH6 218 aa25.71■■□□□ 1.71
CTSA-203ENST00000372459 FOXO6A8MYZ6 492 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 ANKRD65E5RJM6 399 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 MTSS1O43312 755 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 FAM107AO95990 144 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 MAGEA3P43357 314 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 GALNT2Q10471 571 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 C1orf53Q5VUE5 145 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 ZNF534Q76KX8 674 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 TRABD2AQ86V40 505 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 TMEM173Q86WV6 379 aaPredicted RBP25.7■■□□□ 1.7
CTSA-203ENST00000372459 AGGF1Q8N302 714 aaeCLIP25.7■■□□□ 1.7
CTSA-203ENST00000372459 TTC9BQ8N6N2 239 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 HDAC11Q96DB2 347 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 CCT8L2Q96SF2 557 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 SIK2Q9H0K1 926 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 EIF2B3Q9NR50 452 aaKnown RBP25.7■■□□□ 1.7
CTSA-203ENST00000372459 NUDT5Q9UKK9 219 aa25.7■■□□□ 1.7
CTSA-203ENST00000372459 PAGE1O75459 146 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 RTN3O95197 1032 aaPredicted RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 SRGAP2BP0DMP2 458 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 USP46P62068 366 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 RWDD4Q6NW29 188 aaKnown RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 MSANTD2Q6P1R3 559 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 MICALCLQ6ZW33 695 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 ZNF567Q8N184 647 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 C2orf15Q8WU43 125 aaKnown RBP25.69■■□□□ 1.7
CTSA-203ENST00000372459 PAFAH2Q99487 392 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 SENP1Q9P0U3 644 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 GMIPQ9P107 970 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 GGA2Q9UJY4 613 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 MICAL3Q7RTP6 2002 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 KRT15P19012 456 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 YWHAQP27348 245 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 STX2P32856 288 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 IKBKEQ14164 716 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 EFTUD2Q15029 972 aaKnown RBP eCLIP25.69■■□□□ 1.76e-11■■■■■ 49.2
CTSA-203ENST00000372459 MGAT5BQ3V5L5 792 aa25.69■■□□□ 1.7
CTSA-203ENST00000372459 TTC31Q49AM3 519 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms