RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ANKRD35Q8N283 1001 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DENND1AQ8TEH3 1009 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SLC39A13Q96H72 371 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF641Q96N77 438 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 HAUS8Q9BT25 410 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PACSIN1Q9BY11 444 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CDH19Q9H159 772 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SUV39H2Q9H5I1 410 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SLC38A10Q9HBR0 1119 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SIX2Q9NPC8 291 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ARHGEF4Q9NR80 690 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DMAC2Q9NW81 257 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SEPT10Q9P0V9 454 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 POU2F3Q9UKI9 436 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SCINQ9Y6U3 715 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ATP8B3O60423 1300 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ARHGEF35A5YM69 484 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 FAM25EA8MYX2 175 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 H3BNX3 289 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DDX39AO00148 427 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 KCNJ13O60928 360 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CSDE1O75534 798 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TRPA1O75762 1119 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PRDX6P30041 224 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SLC1A1P43005 524 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PTGIRP43119 386 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RPL21P46778 160 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 IDH3AP50213 366 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 JAM2P57087 298 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TGFB2P61812 414 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CDK18Q07002 472 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SPARCL1Q14515 664 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TNIP1Q15025 636 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TCEA2Q15560 299 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 MAPK6Q16659 721 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CYP2A13Q16696 494 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SNAP47Q5SQN1 464 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 NXNQ6DKJ4 435 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 OTOAQ7RTW8 1153 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ULK2Q8IYT8 1036 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 HACE1Q8IYU2 909 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DAW1Q8N136 415 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 LINC00469Q8N7U9 141 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RNF169Q8NCN4 708 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SYTL5Q8TDW5 730 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 NKD1Q969G9 470 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 FAR2Q96K12 515 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 STRA6Q9BX79 667 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TDRD1Q9BXT4 1180 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RAVER2Q9HCJ3 691 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 AGO4Q9HCK5 861 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 XAB2Q9HCS7 855 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RAB26Q9ULW5 256 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ERGIC3Q9Y282 383 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 NR2E1Q9Y466 385 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PCDHA3Q9Y5H8 950 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 UBIAD1Q9Y5Z9 338 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 IKBKGQ9Y6K9 419 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SQORQ9Y6N5 450 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 UTRNP46939 3433 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 FOXO6A8MYZ6 492 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF701M0R085 212 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 KLHL2O95198 593 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 KRT6AP02538 564 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 FGGP02679 453 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 KRT6BP04259 564 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ALAS1P13196 640 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 PBX2P40425 430 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 B2MP61769 119 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 MRPS9P82933 396 aaKnown RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 SGO2Q562F6 1265 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 C1orf146Q5VVC0 180 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 TUBA3EQ6PEY2 450 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 CYP4V2Q6ZWL3 525 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 CADM3Q8N126 398 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ART4Q93070 314 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 WNT2BQ93097 391 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 TAMM41Q96BW9 452 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 TTC25Q96NG3 672 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 AIFM2Q9BRQ8 373 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 CDC42EP4Q9H3Q1 356 aaKnown RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 MOV10Q9HCE1 1003 aaKnown RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 MAP3K20Q9NYL2 800 aaKnown RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 SLC7A8Q9UHI5 535 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ADAMTS6Q9UKP5 1117 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 KCNMB2Q9Y691 235 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ZHX2Q9Y6X8 837 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 SYCE1LA8MT33 242 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 PODXLO00592 558 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms