RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 KCNT1Q5JUK3 1230 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 UBA3Q8TBC4 463 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 EFCAB1Q9HAE3 211 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 RUVBL2Q9Y230 463 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
RAPGEF1-202ENST00000372190 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 MATN2O00339 956 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 SEC24AO95486 1093 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 MSH3P20585 1137 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RCVRNP35243 200 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 PSME3P61289 254 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 LAMTOR4Q0VGL1 99 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ANKMY2Q8IV38 441 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC35G2Q8TBE7 412 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 MYCBPAPQ8TBZ2 947 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 GDPD5Q8WTR4 605 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 CAPNS2Q96L46 248 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RIOX1Q9H6W3 641 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 DBR1Q9UK59 544 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RHOBTB3O94955 611 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 PABPC1P11940 636 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RAD9BQ6WBX8 426 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 REPS2Q8NFH8 660 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ASAP3Q8TDY4 903 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 E2F7Q96AV8 911 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 MRPL9Q9BYD2 267 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RBMX2Q9Y388 322 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ALOX15P16050 662 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 RPL10AP62906 217 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ARHGEF7Q14155 803 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC9A4Q6AI14 798 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 CENPLQ8N0S6 344 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 NKX2-3Q8TAU0 364 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ZIM3Q96PE6 472 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLITRK2Q9H156 845 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 CMTM6Q9NX76 183 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 EEF2KO00418 725 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 SNX4O95219 450 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 ARL4DP49703 201 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 HPCAP84074 193 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-202ENST00000372190 CASTOR2A6NHX0 329 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 NCAM1P13591 858 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ITIH2P19823 946 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CCNA2P20248 432 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.118e-6■■■□□ 16.6
RAPGEF1-202ENST00000372190 THEMIS2Q5TEJ8 643 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 BICRALQ6AI39 1079 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 LRRC74BQ6ZQY2 392 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PROSER1Q86XN7 944 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 SPAG16Q8N0X2 631 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 UCMAQ8WVF2 138 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 TSPAN17Q96FV3 270 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 WDR12Q9GZL7 423 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 AFF4Q9UHB7 1163 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 SUPT3HB4E1H0 165 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CCNKO75909 580 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 SSTP61278 116 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 DGKZQ13574 1117 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CDH18Q13634 790 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 AMER2Q8N7J2 671 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CATSPERBQ9H7T0 1116 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 GGA2Q9UJY4 613 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CORO1CQ9ULV4 474 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 MTSS1O43312 755 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 MED24O75448 989 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 POMCP01189 267 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PRKAR1AP10644 381 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PTPN1P18031 435 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PLD1Q13393 1074 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 RBM20Q5T481 1227 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PID1Q7Z2X4 250 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ITIH5Q86UX2 942 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 LRRC34Q8IZ02 419 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 HNRNPLLQ8WVV9 542 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 STK33Q9BYT3 514 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ABCG2Q9UNQ0 655 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 NOTOA8MTQ0 251 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ATP6V1B2P21281 511 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ALDH6A1Q02252 535 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CERS5Q8N5B7 392 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 TRPC4APQ8TEL6 797 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms