RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FOLH1Q04609 750 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 SLC20A2Q08357 652 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 DEF8Q6ZN54 512 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 RBM43Q6ZSC3 357 aaKnown RBP15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 FRMD7Q6ZUT3 714 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 SPATA2LQ8IUW3 424 aaPredicted RBP15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 ACSF2Q96CM8 615 aaPredicted RBP15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 KLHL28Q9NXS3 571 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 M0R036 132 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 GCP02774 474 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 RAB11FIP2Q7L804 512 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 DPF2Q92785 391 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 INVSQ9Y283 1065 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 SSU72P8A0A1W2PR75 194 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 RRN3P2A6NIE6 340 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 USP12O75317 370 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 LIFRP42702 1097 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 SNX9Q9Y5X1 595 aa15.63■□□□□ 0.09
GTF3C4-201ENST00000372146 PP2D1A8MPX8 630 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 DCXO43602 365 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PKNOX1P55347 436 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 HPS3Q969F9 1004 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 RIOK2Q9BVS4 552 aaKnown RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PIDD1Q9HB75 910 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 DNAJC14Q6Y2X3 702 aaPredicted RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 TRIM48Q8IWZ4 208 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 ERLEC1Q96DZ1 483 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 STARD13Q9Y3M8 1113 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PVALEFA0A1B0GWK0 134 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 METTL18O95568 372 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 ZNF438Q7Z4V0 828 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 RAPGEFL1Q9UHV5 662 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 COG5Q9UP83 839 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 FAM153BP0C7A2 387 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 H2AFXP16104 143 aaPredicted RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 METTL16Q86W50 562 aaKnown RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 KAT2BQ92831 832 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 DMRTB1Q96MA1 342 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CLUP10909 449 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 GRIA3P42263 894 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CBX5P45973 191 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 OXER1Q8TDS5 423 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 GMCL1Q96IK5 515 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 MOV10Q9HCE1 1003 aaKnown RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 TMCO1Q9UM00 188 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 IRF1P10914 325 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 IL13P35225 146 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 USP11P51784 963 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CDKL1Q00532 357 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 RGS1Q08116 209 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 IP6K1Q92551 441 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 TSPOAP1O95153 1857 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 SH3D21A4FU49 640 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 H3BM21 787 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 FCHO1O14526 889 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CPB1P15086 417 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 FXR1P51114 621 aaKnown RBP eCLIP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PTPN5P54829 565 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 RPL6Q02878 288 aaKnown RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.092e-6■■■■□ 19.6
GTF3C4-201ENST00000372146 MED22Q15528 200 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PLET1Q6UQ28 207 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CINPQ9BW66 212 aaPredicted RBP15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 XPR1Q9UBH6 696 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 EDARQ9UNE0 448 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 OR5F1O95221 314 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 SLC2A4P14672 509 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PHF21BQ96EK2 531 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 CLEC4AQ9UMR7 237 aa15.62■□□□□ 0.09
GTF3C4-201ENST00000372146 PLA2G6O60733 806 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 MT-CO1P00395 513 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 WDR72Q3MJ13 1102 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 EGFLAMQ63HQ2 1017 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 LRRC69Q6ZNQ3 347 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 FRMD8Q9BZ67 464 aaPredicted RBP15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 GREM2Q9H772 168 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 VTI1BQ9UEU0 232 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 CCRL2O00421 344 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 ULK1O75385 1050 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 HPCAL1P37235 193 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 USP46P62068 366 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 NYAP1Q6ZVC0 841 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 FAXCQ5TGI0 409 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 RMDN3Q96TC7 470 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 PTGFRNQ9P2B2 879 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 CYBBP04839 570 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 DLG4P78352 724 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 GALNTL5Q7Z4T8 443 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 IFNLR1Q8IU57 520 aaPredicted RBP15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 ANKS1AQ92625 1134 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 ACOX2Q99424 681 aa15.61■□□□□ 0.09
GTF3C4-201ENST00000372146 SMIM22K7EJ46 135 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms