RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MAGEB5Q9BZ81 275 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CCSER2Q9H7U1 834 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ATG2AQ2TAZ0 1938 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 HMGB1P1B2RPK0 211 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 CCDC188H7C350 402 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TBX18O95935 607 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 KRT10P13645 584 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 EPCAMP16422 314 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 ACTN3Q08043 901 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 CUL1Q13616 776 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 PPP2R5DQ14738 602 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 PPM1LQ5SGD2 360 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 PRELID2Q8N945 189 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 GDPD5Q8WTR4 605 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 KCTD15Q96SI1 283 aaPredicted RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 DHX35Q9H5Z1 703 aaKnown RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 MAN1C1Q9NR34 630 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TMPRSS4Q9NRS4 437 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TLR6Q9Y2C9 796 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 MSI1O43347 362 aaKnown RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 HOXA9P31269 272 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TUBP50607 506 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 ADCY2Q08462 1091 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 EFEMP1Q12805 493 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 KRT81Q14533 505 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 ARL13BQ3SXY8 428 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 C10orf120Q5SQS8 335 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 KLHDC10Q6PID8 442 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 CAPN12Q6ZSI9 719 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 ADGRD2Q7Z7M1 963 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TMC8Q8IU68 726 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 FAF2Q96CS3 445 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 THOC1Q96FV9 657 aaKnown RBP19.05■□□□□ 0.64
VEGFA-206ENST00000372077 CTNNAL1Q9UBT7 734 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 TBK1Q9UHD2 729 aa19.05■□□□□ 0.64
VEGFA-206ENST00000372077 PPP2R2AP63151 447 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 HECTD3Q5T447 861 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 CCDC137Q6PK04 289 aaKnown RBP19.04■□□□□ 0.64
VEGFA-206ENST00000372077 ZNF670Q9BS34 389 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 TKTL2Q9H0I9 626 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 LAMA2P24043 3122 aaKnown RBP19.04■□□□□ 0.64
VEGFA-206ENST00000372077 GOLGA6L7A0A1B0GV03 622 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 PER2O15055 1255 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 TRIP4Q15650 581 aaPredicted RBP19.04■□□□□ 0.64
VEGFA-206ENST00000372077 LONRF1Q17RB8 773 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 PABPC1LQ4VXU2 614 aaKnown RBP19.04■□□□□ 0.64
VEGFA-206ENST00000372077 EFHC2Q5JST6 749 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 ELMOD1Q8N336 334 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 MREGQ8N565 214 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 CALN1Q9BXU9 219 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.04■□□□□ 0.642e-7■■■■□ 20.9
VEGFA-206ENST00000372077 MARCH2Q9P0N8 246 aa19.04■□□□□ 0.64
VEGFA-206ENST00000372077 GMNCA6NCL1 334 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 KCNU1A8MYU2 1149 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 TJP3O95049 919 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CCR1P32246 355 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 MMRN1Q13201 1228 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CYP1B1Q16678 543 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 PYROXD2Q8N2H3 581 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CABS1Q96KC9 395 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 FCRL2Q96LA5 508 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-206ENST00000372077 RNF157Q96PX1 679 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 ERP44Q9BS26 406 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 RCOR3Q9P2K3 495 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CHD9Q3L8U1 2897 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CHN1P15882 459 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 ATP5C1P36542 298 aaKnown RBP19.03■□□□□ 0.64
VEGFA-206ENST00000372077 TBX4P57082 545 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 SEMA3BQ13214 749 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 DUSP6Q16828 381 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 KAZNQ674X7 775 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 CHRDL2Q6WN34 429 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 RNF34Q969K3 372 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 DPP7Q9UHL4 492 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 RASAL2Q9UJF2 1139 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 DNMT3LQ9UJW3 386 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 HCFC2Q9Y5Z7 792 aa19.03■□□□□ 0.64
VEGFA-206ENST00000372077 PIAS1O75925 651 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 OAS1P00973 400 aaKnown RBP19.02■□□□□ 0.64
VEGFA-206ENST00000372077 IGLV3-27P01718 113 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 HNRNPA1P09651 372 aaKnown RBP eCLIP19.02■□□□□ 0.64
VEGFA-206ENST00000372077 PMS2P54278 862 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 BBS12Q6ZW61 710 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 HS6ST3Q8IZP7 471 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 HAPLN3Q96S86 360 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 OSBPL2Q9H1P3 480 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 SLC12A6Q9UHW9 1150 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 ANAPC1Q9H1A4 1944 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 GOLGA6L10A0A0M3HER8 536 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 CCL16O15467 120 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 ANKRD20A8PQ5CZ79 823 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 RBM23Q86U06 439 aaKnown RBP19.02■□□□□ 0.64
VEGFA-206ENST00000372077 ANKRD42Q8N9B4 389 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 C12orf50Q8NA57 414 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-206ENST00000372077 EPB41L4BQ9H329 900 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 TLE6Q9H808 572 aa19.02■□□□□ 0.64
VEGFA-206ENST00000372077 HBS1LQ9Y450 684 aaKnown RBP19.02■□□□□ 0.64
VEGFA-206ENST00000372077 COCHO43405 550 aa19.01■□□□□ 0.63
VEGFA-206ENST00000372077 RFPL2O75678 378 aa19.01■□□□□ 0.63
VEGFA-206ENST00000372077 POU2F2P09086 479 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms