RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SPC25Q9HBM1 224 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 NEBLO76041 1014 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 FYNP06241 537 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ADRA1BP35368 520 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 GRIK1P39086 918 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 DLG2Q15700 870 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 AGAP2Q99490 1192 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 KATNAL1Q9BW62 490 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 TMEM120AQ9BXJ8 343 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
PDE6C-201ENST00000371447 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
PDE6C-201ENST00000371447 A0A0A0MRY4 1105 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 KRT38O76015 456 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 STAU1O95793 577 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 LTFP02788 710 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 KCNE1P15382 129 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PBX3P40426 434 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ADAM17P78536 824 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 CDC42EP1Q00587 391 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PRKCZQ05513 592 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 KDSRQ06136 332 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 IL31Q6EBC2 164 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ARHGAP36Q6ZRI8 547 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 LONP2Q86WA8 852 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 IFNL1Q8IU54 200 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 GSDMBQ8TAX9 411 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 AGAP11Q8TF27 550 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 MFSD3Q96ES6 412 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SPATA13Q96N96 652 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 GDAP2Q9NXN4 497 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PPARGC1AQ9UBK2 798 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PRKAG3Q9UGI9 489 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 CCND3P30281 292 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ALDH18A1P54886 795 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 BST1Q10588 318 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 KCNA10Q16322 511 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 HSP90AA5PQ58FG0 334 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 LRRTM3Q86VH5 581 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ZDHHC17Q8IUH5 632 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 MZB1Q8WU39 189 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 APBA2Q99767 749 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 XPNPEP3Q9NQH7 507 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 DNAJC6O75061 913 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 AXLP30530 894 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 AVPR1AP37288 418 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 PCSK7Q16549 785 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 TFAP2DQ7Z6R9 452 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDE6C-201ENST00000371447 FERMT1Q9BQL6 677 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 ZFYVE28Q9HCC9 887 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 MPP6Q9NZW5 540 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.48
PDE6C-201ENST00000371447 SDR42E2A6NKP2 422 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 TPP1O14773 563 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 NDC80O14777 642 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 TYK2P29597 1187 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 ZNF513Q8N8E2 541 aaPredicted RBP12.07□□□□□ -0.48
PDE6C-201ENST00000371447 C10orf82Q8WW14 230 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 ZNF778Q96MU6 729 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 MTG1Q9BT17 334 aaPredicted RBP12.07□□□□□ -0.48
PDE6C-201ENST00000371447 DNAI2Q9GZS0 605 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 CHRAC1Q9NRG0 131 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
PDE6C-201ENST00000371447 CHUKO15111 745 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 PMPCBO75439 489 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 MT-CYBP00156 380 aaPredicted RBP12.07□□□□□ -0.48
PDE6C-201ENST00000371447 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
PDE6C-201ENST00000371447 GPR15P49685 360 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 DAOAP59103 153 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 MXRA7P84157 204 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 SLC20A2Q08357 652 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 ITKQ08881 620 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 PDK1Q15118 436 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 DDR2Q16832 855 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 TAF2Q6P1X5 1199 aa12.07□□□□□ -0.48
PDE6C-201ENST00000371447 TOP6BLQ8N6T0 577 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms