RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 NPY2RP49146 381 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 NDST1P52848 882 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 XIAPP98170 497 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 RORBQ92753 470 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 CPB2Q96IY4 423 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 MARK4Q96L34 752 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 APBA2Q99767 749 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 STX7O15400 261 aaKnown RBP16.27■□□□□ 0.2
COL17A1-202ENST00000369733 TTKP33981 857 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.2
COL17A1-202ENST00000369733 AARS2Q5JTZ9 985 aaKnown RBP16.27■□□□□ 0.2
COL17A1-202ENST00000369733 LRRC57Q8N9N7 239 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 ATG16L2Q8NAA4 619 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 C6orf62Q9GZU0 229 aaPredicted RBP16.27■□□□□ 0.2
COL17A1-202ENST00000369733 HMG20AQ9NP66 347 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 AP4B1Q9Y6B7 739 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 AK5Q9Y6K8 562 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 CYP3A7-CYP3A51PA0A087WV96 503 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 CSDE1O75534 798 aaKnown RBP16.27■□□□□ 0.19
COL17A1-202ENST00000369733 CYP3A7P24462 503 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 RGS21Q2M5E4 152 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 CHSY1Q86X52 802 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 DGCR14Q96DF8 476 aaKnown RBP16.27■□□□□ 0.19
COL17A1-202ENST00000369733 NDEL1Q9GZM8 345 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 USE1Q9NZ43 259 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 HSMCR30P0CW71 290 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 SOAT1P35610 550 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 SLC9A9Q8IVB4 645 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 PRMT6Q96LA8 375 aaPredicted RBP16.27■□□□□ 0.19
COL17A1-202ENST00000369733 MECRQ9BV79 373 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 SYTL2Q9HCH5 934 aa16.27■□□□□ 0.19
COL17A1-202ENST00000369733 HACD1B0YJ81 288 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 BIRC5O15392 142 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 PAEPP09466 180 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 NNMTP40261 264 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 TAS2R40P59535 323 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 GJC2Q5T442 439 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 TMEM109Q9BVC6 243 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 STN1Q9H668 368 aaKnown RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 GAKO14976 1311 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 hCG_1818297A0A087WSY0 165 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 C2orf81A6NN90 581 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 ERI2A8K979 691 aaKnown RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 LAMTOR4Q0VGL1 99 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 FRG1Q14331 258 aaKnown RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 MID1IP1Q9NPA3 183 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 H2AFY2Q9P0M6 372 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 MOSPD1Q9UJG1 213 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 RGSL1A5PLK6 1076 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 CDH8P55286 799 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 TAF5Q15542 800 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 LPCAT4Q643R3 524 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 TMEM26Q6ZUK4 368 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 EID3Q8N140 333 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 SVOPQ8N4V2 548 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 FAM120BQ96EK7 910 aaKnown RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 ZBTB45Q96K62 511 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 DENND2DQ9H6A0 471 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 LRRC4CQ9HCJ2 640 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 STMN3Q9NZ72 180 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 DMTF1Q9Y222 760 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 FOXO6A8MYZ6 492 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 PSMD12O00232 456 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 CNOT3O75175 753 aaKnown RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 PIGWQ7Z7B1 504 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 BRSK2Q8IWQ3 736 aa16.26■□□□□ 0.19
COL17A1-202ENST00000369733 CINPQ9BW66 212 aaPredicted RBP16.26■□□□□ 0.19
COL17A1-202ENST00000369733 HS6ST1O60243 411 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 GLP2RO95838 553 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 CSE1LP55060 971 aaKnown RBP16.25■□□□□ 0.19
COL17A1-202ENST00000369733 PGS1Q32NB8 556 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 ADGRF2Q8IZF7 708 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 FNIP1Q8TF40 1166 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 PLEKHG4BQ96PX9 1271 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 DGCR6LQ9BY27 220 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 CCDC154A6NI56 674 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 CYP2C9P11712 490 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 BFSP2Q13515 415 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 SLC1A5Q15758 541 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 NIPA1Q7RTP0 329 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 SCUBE3Q8IX30 993 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 ROGDIQ9GZN7 287 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 POLG2Q9UHN1 485 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 TGFB1I1O43294 461 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 VAPBO95292 243 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 PRIM2P49643 509 aa16.25■□□□□ 0.19
COL17A1-202ENST00000369733 RINLQ6ZS11 566 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms