RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 BIRC8Q96P09 236 aa17.9■□□□□ 0.46
CHTOP-203ENST00000368690 MRPL1Q9BYD6 325 aaKnown RBP17.9■□□□□ 0.46
CHTOP-203ENST00000368690 TMEM134Q9H6X4 195 aa17.9■□□□□ 0.46
CHTOP-203ENST00000368690 PNPOQ9NVS9 261 aa17.9■□□□□ 0.46
CHTOP-203ENST00000368690 SEPT9Q9UHD8 586 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-203ENST00000368690 TOMM70O94826 608 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 ZBED1O96006 694 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 THRAP10827 490 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 NCF2P19878 526 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 MYL6P60660 151 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 RPS6P62753 249 aaKnown RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 MMRN1Q13201 1228 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PPIL2Q13356 520 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 EMC2Q15006 297 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 SYCP2LQ5T4T6 812 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 DHRS4L2Q6PKH6 230 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 EPGNQ6UW88 154 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF534Q76KX8 674 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 MAP7D3Q8IWC1 876 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PHTF2Q8N3S3 785 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PLD5Q8N7P1 536 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 DEPTORQ8TB45 409 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 CNDP1Q96KN2 507 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 CYTH4Q9UIA0 394 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PCDHGA4Q9Y5G9 962 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PEX10O60683 326 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF143P52747 638 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PRKCEQ02156 737 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PDE1CQ14123 709 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 SURF1Q15526 300 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF394Q53GI3 561 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 CYP4V2Q6ZWL3 525 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 RSPH3Q86UC2 560 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 EMC1Q8N766 993 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 STON2Q8WXE9 905 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PEBP4Q96S96 227 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 RMDN3Q96TC7 470 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PRPF18Q99633 342 aaKnown RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 TEX13BQ9BXU2 312 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PORCNQ9H237 461 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF214Q9UL59 606 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-203ENST00000368690 PCDHB12Q9Y5F1 795 aa17.89■□□□□ 0.45
CHTOP-203ENST00000368690 LOC100653049A0A140TA62 436 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 TESPA1A2RU30 521 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 CXCL11O14625 94 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 KRT34O76011 436 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 CELF2O95319 508 aaKnown RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 ALDOAP04075 364 aaKnown RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 KCNA4P22459 653 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 PROZP22891 400 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 PPIDQ08752 370 aaKnown RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 NIPAL4Q0D2K0 466 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 XKR3Q5GH77 459 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 SWSAP1Q6NVH7 229 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 FNDC8Q8TC99 324 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 CNBD2Q96M20 576 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 CPXM1Q96SM3 734 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 CNPY3Q9BT09 278 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 TARS2Q9BW92 718 aaKnown RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 COPG2Q9UBF2 871 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 FBXO40Q9UH90 709 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 BLOC1S6Q9UL45 172 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 GNEQ9Y223 722 aaKnown RBP17.88■□□□□ 0.45
CHTOP-203ENST00000368690 SQORQ9Y6N5 450 aa17.88■□□□□ 0.45
CHTOP-203ENST00000368690 DCXO43602 365 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ERBB2P04626 1255 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 RALBP11234 206 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ATP6V1B1P15313 513 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF23P17027 643 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 MX2P20592 715 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 RBL1P28749 1068 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ADSLP30566 484 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ASPAP45381 313 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CDK9P50750 372 aaKnown RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 C16orf46Q6P387 395 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 TSHZ1Q6ZSZ6 1077 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 C10orf107Q8IVU9 208 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 REPS2Q8NFH8 660 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 TJP2Q9UDY2 1190 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 RSL24D1Q9UHA3 163 aaKnown RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ZNHIT2Q9UHR6 403 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 RLFQ13129 1914 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 PRSS51A0A1B0GVH4 220 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF487B1APH4 448 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 E9PBE3 544 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 APOL1O14791 398 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ZBTB14O43829 449 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 GCATO75600 419 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 TOP3BO95985 862 aaKnown RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 PRKCGP05129 697 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 GLDCP23378 1020 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 PCSK6P29122 969 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CCND2P30279 289 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 OAZ1P54368 228 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 LPIN1Q14693 890 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms