RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 SORCS1Q8WY21 1168 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 KCNB2Q92953 911 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 MSTO1Q9BUK6 570 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 NEUROG2Q9H2A3 272 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 KLHL11Q9NVR0 708 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 UCKL1Q9NWZ5 548 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 COMMD8Q9NX08 183 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 ZNF510Q9Y2H8 683 aa10.87□□□□□ -0.67
TUBE1-201ENST00000368657 CPED1A4D0V7 1026 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 EME2A4GXA9 379 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-201ENST00000368657 SCAMP1O15126 338 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 LATO43561 262 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 RNASEH1O60930 286 aaKnown RBP10.86□□□□□ -0.67
TUBE1-201ENST00000368657 ZDHHC11BP0C7U3 371 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 PLS3P13797 630 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 SCP2P22307 547 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 EVCP57679 992 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 LACTB2Q53H82 288 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-201ENST00000368657 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
TUBE1-201ENST00000368657 SV2AQ7L0J3 742 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 DTX1Q86Y01 620 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 LRRC52Q8N7C0 313 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 TEX19Q8NA77 164 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 KCNN1Q92952 543 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 KLHDC7BQ96G42 594 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 PCED1BQ96HM7 432 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 OMDQ99983 421 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-201ENST00000368657 CRTAC1Q9NQ79 661 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 SEL1LQ9UBV2 794 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 AGAP1Q9UPQ3 857 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 DNM3Q9UQ16 869 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 DMTF1Q9Y222 760 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 SNX9Q9Y5X1 595 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
TUBE1-201ENST00000368657 RP1L1Q8IWN7 2480 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 A0A1W2PQ27 194 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 A0A1W2PQ64 194 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 A0A1W2PQC6 194 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 K7ESM1 405 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 HNRNPDLO14979 420 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 PIAS2O75928 621 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 PIGRP01833 764 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 LMO2P25791 158 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 CD82P27701 267 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 ATP5C1P36542 298 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 CCT6AP40227 531 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 PLA2G4AP47712 749 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 SOWAHAQ2M3V2 549 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 TMEM215Q68D42 235 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 RINT1Q6NUQ1 792 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 ZCCHC8Q6NZY4 707 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 C1orf186Q6ZWK4 172 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 EFL1Q7Z2Z2 1120 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 LAPTM4BQ86VI4 370 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 CACTINQ8WUQ7 758 aaKnown RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 ABHD17AQ96GS6 310 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 RUBCNLQ9H714 662 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 PRDM8Q9NQV8 689 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 IL37Q9NZH6 218 aa10.85□□□□□ -0.67
TUBE1-201ENST00000368657 COL27A1Q8IZC6 1860 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-201ENST00000368657 MTORP42345 2549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 NIPBLQ6KC79 2804 aaeCLIP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3DA0A087WVF3 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3IA0A087WXS9 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3EA0A087X179 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3KA0A087X1G2 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 SLC12A8A0AV02 714 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3FA6NER0 549 aaPredicted RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 PRR19A6NJB7 356 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3LB9A6J9 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 EPB41L2O43491 1005 aaKnown RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 HCRTO43612 131 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TLR5O60602 858 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 RNASEH2AO75792 299 aaKnown RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 CYBBP04839 570 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3HP0C7X1 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 ACOT2P49753 483 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 PRSS12P56730 875 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 PSMC1P62191 440 aaKnown RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 KCNMA1Q12791 1236 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 SPIDRQ14159 915 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 CDKN3Q16667 212 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 BMT2Q1RMZ1 405 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3GQ6DHY5 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3CQ6IPX1 549 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 Q6ZNB5 142 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 HS2ST1Q7LGA3 356 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 TBC1D3Q8IZP1 549 aaPredicted RBP10.84□□□□□ -0.67
TUBE1-201ENST00000368657 IFT43Q96FT9 208 aa10.84□□□□□ -0.67
TUBE1-201ENST00000368657 ELOVL4Q9GZR5 314 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms