RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 DHX35Q9H5Z1 703 aaKnown RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 LZTFL1Q9NQ48 299 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 AP4E1Q9UPM8 1137 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 PPP2R2CQ9Y2T4 447 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 KRBA1A5PL33 1030 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 FAM72CH0Y354 149 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 STK25O00506 426 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 SPOPO43791 374 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 CREB3O43889 395 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 COMTP21964 271 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 CTHP32929 405 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 PCK1P35558 622 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 IRAK1P51617 712 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 HADHBP55084 474 aaKnown RBP14.36□□□□□ -0.11
TPM3-211ENST00000368531 MTA1Q13330 715 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 CA9Q16790 459 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
TPM3-211ENST00000368531 GAB4Q2WGN9 574 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 FAM72AQ5TYM5 149 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 FYB2Q5VWT5 728 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 FAM72DQ6L9T8 149 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 LRRC31Q6UY01 552 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 DAAM2Q86T65 1068 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 FAM72BQ86X60 149 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 SIX5Q8N196 739 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 CARNMT1Q8N4J0 409 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 HJURPQ8NCD3 748 aaPredicted RBP14.36□□□□□ -0.11
TPM3-211ENST00000368531 EDAQ92838 391 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 NTAN1Q96AB6 310 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 C8orf33Q9H7E9 229 aaPredicted RBP14.36□□□□□ -0.11
TPM3-211ENST00000368531 ARHGEF3Q9NR81 526 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 KLHL11Q9NVR0 708 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 WNT16Q9UBV4 365 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 OR12D3Q9UGF7 316 aa14.36□□□□□ -0.11
TPM3-211ENST00000368531 DOCK4Q8N1I0 1966 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 BTNL10A8MVZ5 291 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 E9PAM4 449 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 TRIM24O15164 1050 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 HOXC11O43248 304 aaPredicted RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 KRT86O43790 486 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 RARAP10276 462 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 MAN1A1P33908 653 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 KDSRQ06136 332 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 PON2Q15165 354 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 PPP6R3Q5H9R7 873 aaPredicted RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 RABGAP1LQ5R372 815 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 TXNDC11Q6PKC3 985 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 CYP4V2Q6ZWL3 525 aaPredicted RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 RALGPS2Q86X27 583 aaPredicted RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 FAM3CQ92520 227 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 C1orf74Q96LT6 269 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 OSBPL2Q9H1P3 480 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 TRMT1Q9NXH9 659 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 MPP6Q9NZW5 540 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 MARK1Q9P0L2 795 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 CLEC4EQ9ULY5 219 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 PYCARDQ9ULZ3 195 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
TPM3-211ENST00000368531 ALG6Q9Y672 507 aa14.35□□□□□ -0.11
TPM3-211ENST00000368531 KIAA1549LQ6ZVL6 1849 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 SPTBN5Q9NRC6 3674 aaKnown RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 GRID2IPA4D2P6 1211 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 GFRA2O00451 464 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 CNTN5O94779 1100 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 ALADP13716 330 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 HOXD9P28356 352 aaPredicted RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 OPRD1P41143 372 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 NUMBP49757 651 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 GALK1P51570 392 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 AIF1P55008 147 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 AMPD2Q01433 879 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 SIGLEC14Q08ET2 396 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 SCAPQ12770 1279 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 ALFQ53S48 1182 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 ZNF683Q8IZ20 524 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 KCTD15Q96SI1 283 aaPredicted RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 P2RY13Q9BPV8 354 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 FBRSL1Q9HCM7 1045 aaKnown RBP14.34□□□□□ -0.11
TPM3-211ENST00000368531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM3-211ENST00000368531 ATG2BQ96BY7 2078 aa14.34□□□□□ -0.11
TPM3-211ENST00000368531 H0Y626 953 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TNFRSF10AO00220 468 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 CACNG3O60359 315 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 TULP3O75386 442 aa14.33□□□□□ -0.12
TPM3-211ENST00000368531 PALMO75781 387 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms