RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 FBXO21O94952 628 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 CALCAP01258 141 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ATP5BP06576 529 aaKnown RBP16.65■□□□□ 0.26
CKS1B-202ENST00000368436 BMP6P22004 513 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 CD70P32970 193 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ACSL1P33121 698 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 TBX4P57082 545 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 RPS14P62263 151 aaKnown RBP16.65■□□□□ 0.26
CKS1B-202ENST00000368436 NUCB2P80303 420 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 GCNT1Q02742 428 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ZBTB16Q05516 673 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 CETN1Q12798 172 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 IL27RAQ6UWB1 636 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 DBX2Q6ZNG2 339 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 RRAGAQ7L523 313 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 GLRX5Q86SX6 157 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ARHGEF19Q8IW93 802 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 FIBINQ8TAL6 211 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ADAMTS14Q8WXS8 1223 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 ZCCHC14Q8WYQ9 949 aaKnown RBP16.65■□□□□ 0.26
CKS1B-202ENST00000368436 GOLGA1Q92805 767 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 TTC17Q96AE7 1141 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
CKS1B-202ENST00000368436 C6orf106Q9H6K1 298 aaPredicted RBP16.65■□□□□ 0.26
CKS1B-202ENST00000368436 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 IL21RQ9HBE5 538 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 OSGEPQ9NPF4 335 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 SUN2Q9UH99 717 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 PCOLCE2Q9UKZ9 415 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 CNTN6Q9UQ52 1028 aa16.65■□□□□ 0.26
CKS1B-202ENST00000368436 PLXNB3Q9ULL4 1909 aa16.64■□□□□ 0.26
CKS1B-202ENST00000368436 PTPRBP23467 1997 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 SRRM3A6NNA2 597 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-202ENST00000368436 CER1O95813 267 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 CAPNS1P04632 268 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 FTH1P19P0C7X4 201 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 POLR2EP19388 210 aaKnown RBP16.64■□□□□ 0.25
CKS1B-202ENST00000368436 MATKP42679 507 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 GPD2P43304 727 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 HLA-BQ31612 363 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 NADSYN1Q6IA69 706 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 TRIM59Q8IWR1 403 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 MYO19Q96H55 970 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 SLC39A13Q96H72 371 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 PRICKLE1Q96MT3 831 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-202ENST00000368436 KREMEN1Q96MU8 473 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-202ENST00000368436 PCDHGB2Q9Y5G2 931 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 SLCO1B1Q9Y6L6 691 aa16.64■□□□□ 0.25
CKS1B-202ENST00000368436 AFF3P51826 1226 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 NNTQ13423 1086 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 MORC3Q14149 939 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 BEND5Q7L4P6 421 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 MFN1Q8IWA4 741 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 SCUBE3Q8IX30 993 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 HJURPQ8NCD3 748 aaPredicted RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 DQX1Q8TE96 717 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 NELFBQ8WX92 580 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 MYEOVQ96EZ4 313 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 DDX50Q9BQ39 737 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 MIS12Q9H081 205 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 BTBD1Q9H0C5 482 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 RSPH9Q9H1X1 276 aaPredicted RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 RALYQ9UKM9 306 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 TLR6Q9Y2C9 796 aa16.63■□□□□ 0.25
CKS1B-202ENST00000368436 FNDC3AQ9Y2H6 1198 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 NYNRINQ9P2P1 1898 aaKnown RBP16.63■□□□□ 0.25
CKS1B-202ENST00000368436 A0A1B0GVT2 93 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 SEMA4FO95754 770 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 GNA14O95837 355 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 DNTTP04053 509 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 CSNK1EP49674 416 aaKnown RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 MEA1Q16626 185 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 KDM1BQ8NB78 822 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 BAHD1Q8TBE0 780 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 SETD7Q8WTS6 366 aaKnown RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 STK32AQ8WU08 396 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 BIRC7Q96CA5 298 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 MRGPRX3Q96LB0 322 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 SLC4A5Q9BY07 1137 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 SGK2Q9HBY8 427 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 KIAA1522Q9P206 1035 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 STIM2Q9P246 746 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 INTS6Q9UL03 887 aaKnown RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
CKS1B-202ENST00000368436 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 TP53BP1Q12888 1972 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-202ENST00000368436 FAM208BQ5VWN6 2430 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 WDFY3Q8IZQ1 3526 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 PLXNA2O75051 1894 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms