RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 RAP1GAP2Q684P5 730 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 HTR3DQ70Z44 454 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 KIAA1524Q8TCG1 905 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 HSPH1Q92598 858 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 WBP2Q969T9 261 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 FOXQ1Q9C009 403 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 LINC00597Q9H2U6 94 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ECT2Q9H8V3 914 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ARHGEF38Q9NXL2 777 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 AP4E1Q9UPM8 1137 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 KIF5CO60282 957 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 GREM1O60565 184 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 TSPAN3O60637 253 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 PAGE1O75459 146 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 NFATC1O95644 943 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CYBBP04839 570 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 KRT7P08729 469 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CD72P21854 359 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CHKAP35790 457 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 MAGEA9P43362 315 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 AIF1P55008 147 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 KRT81Q14533 505 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 BHMTQ93088 406 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 NTAN1Q96AB6 310 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 GPATCH2LQ9NWQ4 482 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 DLGAP2Q9P1A6 1054 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 MTF2Q9Y483 593 aaPredicted RBP13.09□□□□□ -0.31
EFNA1-201ENST00000368406 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
EFNA1-201ENST00000368406 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 CREB3O43889 395 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 FTCDO95954 541 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ADH1CP00326 375 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 KLKB1P03952 638 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 COL9A1P20849 921 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TACR2P21452 398 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TARSP26639 723 aaKnown RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ADRA1BP35368 520 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 GGCXP38435 758 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 FZD5Q13467 585 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ANO4Q32M45 955 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 KCNT1Q5JUK3 1230 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ADGRF1Q5T601 910 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ERMARDQ5T6L9 678 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ACBD5Q5T8D3 534 aaPredicted RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 Q6ZNB5 142 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TPGS1Q6ZTW0 290 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 CPNE8Q86YQ8 564 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 RHOT1Q8IXI2 618 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TTC8Q8TAM2 541 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 DDI1Q8WTU0 396 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 EPAS1Q99814 870 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 SNRNP25Q9BV90 132 aaKnown RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 KLHL11Q9NVR0 708 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 XPO7Q9UIA9 1087 aaKnown RBP13.08□□□□□ -0.32
EFNA1-201ENST00000368406 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 FZD10Q9ULW2 581 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 ALG6Q9Y672 507 aa13.08□□□□□ -0.32
EFNA1-201ENST00000368406 MIA3Q5JRA6 1907 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 DAPK3O43293 454 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 SRGAP2O75044 1071 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 KRT1P04264 644 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 DCNP07585 359 aaKnown RBP13.07□□□□□ -0.32
EFNA1-201ENST00000368406 TCF4P15884 667 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 GJA4P35212 333 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 SOX9P48436 509 aa13.07□□□□□ -0.32
EFNA1-201ENST00000368406 DNA2P51530 1060 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms