RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC25A52Q3SY17 297 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 C2CD6Q53TS8 623 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 FIGNQ5HY92 759 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 FAM102AQ5T9C2 384 aaPredicted RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 RNF43Q68DV7 783 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 ANKS1BQ7Z6G8 1248 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 CCDC117Q8IWD4 279 aaPredicted RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 CHPFQ8IZ52 775 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 SLC30A5Q8TAD4 765 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 GAB3Q8WWW8 586 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 BAP1Q92560 729 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 RUBCNQ92622 972 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 PGAP3Q96FM1 320 aaPredicted RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 ACOX2Q99424 681 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 GABRG3Q99928 467 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 NUP58Q9BVL2 599 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 FAM204AQ9H8W3 233 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 ZDHHC4Q9NPG8 344 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 AIPL1Q9NZN9 384 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 STIM2Q9P246 746 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 THAP10Q9P2Z0 257 aaPredicted RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 RAB23Q9ULC3 237 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 SYNJ2BP-COX16A0A087WUM0 186 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 WASH3PC4AMC7 463 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ZBTB24O43167 697 aaPredicted RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 RPP40O75818 363 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 TACR2P21452 398 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 TNFAIP3P21580 790 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 FLT3P36888 993 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 WASP42768 502 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 NSFP46459 744 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 CXCR3P49682 368 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 SULT1E1P49888 294 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 SGSHP51688 502 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 CENPCQ03188 943 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 DEUP1Q05D60 604 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 PTP4A2Q12974 167 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 SRSF5Q13243 272 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 NFKBIBQ15653 356 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 CLEC16AQ2KHT3 1053 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 BRMS1LQ5PSV4 323 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ACBD5Q5T8D3 534 aaPredicted RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 EGFLAMQ63HQ2 1017 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 RAP1GAP2Q684P5 730 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 TMEM215Q68D42 235 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ANO7Q6IWH7 933 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ACAD10Q6JQN1 1059 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 LRSAM1Q6UWE0 723 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 MMS22LQ6ZRQ5 1243 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 CEP68Q76N32 757 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 SND1Q7KZF4 910 aaKnown RBP eCLIP10.2□□□□□ -0.78
CD48-202ENST00000368046 PHF13Q86YI8 300 aaPredicted RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 LGI2Q8N0V4 545 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 CFAP52Q8N1V2 620 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.2□□□□□ -0.78
CD48-202ENST00000368046 HJURPQ8NCD3 748 aaPredicted RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 WFIKKN2Q8TEU8 576 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ZC3H10Q96K80 434 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 PRMT1Q99873 361 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 NUCKS1Q9H1E3 243 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 ABCB8Q9NUT2 735 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 ADAM22Q9P0K1 906 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 COX16Q9P0S2 106 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 XPO7Q9UIA9 1087 aaKnown RBP10.2□□□□□ -0.78
CD48-202ENST00000368046 PLA2G4CQ9UP65 541 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 STON1Q9Y6Q2 735 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 MYO16Q9Y6X6 1858 aa10.2□□□□□ -0.78
CD48-202ENST00000368046 FAM170AA1A519 330 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 LRRC53A6NM62 1247 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 F5H5T6 163 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 H0Y626 953 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 CALB1P05937 261 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 ATP5BP06576 529 aaKnown RBP10.19□□□□□ -0.78
CD48-202ENST00000368046 RETP07949 1114 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 PABPC1P11940 636 aaKnown RBP10.19□□□□□ -0.78
CD48-202ENST00000368046 KRT3P12035 628 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 HOXB2P14652 356 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 POLR2EP19388 210 aaKnown RBP10.19□□□□□ -0.78
CD48-202ENST00000368046 PBX1P40424 430 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 PRKCIP41743 596 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 RPS24P62847 133 aaKnown RBP10.19□□□□□ -0.78
CD48-202ENST00000368046 ENPP2Q13822 863 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 BYSLQ13895 437 aaKnown RBP10.19□□□□□ -0.78
CD48-202ENST00000368046 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 LAIR1Q6GTX8 287 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 PPP1R2P3Q6NXS1 205 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 FBXL22Q6P050 247 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 PRR23BQ6ZRT6 265 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 CHST9Q7L1S5 443 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 ADIPOR2Q86V24 386 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 CHSY1Q86X52 802 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 MFN1Q8IWA4 741 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 AHI1Q8N157 1196 aa10.19□□□□□ -0.78
CD48-202ENST00000368046 PGBD3Q8N328 593 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms