RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 CCDC26Q8TAB7 109 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 RUBCNQ92622 972 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 SAMD11Q96NU1 681 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 SERPINB11Q96P15 392 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 HAPLN3Q96S86 360 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 ERP44Q9BS26 406 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 EMILIN2Q9BXX0 1053 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 FRMD8P1Q9BZ68 369 aaPredicted RBP9.82□□□□□ -0.84
VTA1-201ENST00000367621 C10orf88Q9H8K7 445 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 EPB41L5Q9HCM4 733 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 HOMER3Q9NSC5 361 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 MARCH2Q9P0N8 246 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 TLR6Q9Y2C9 796 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 KIAA1671Q9BY89 1806 aa9.82□□□□□ -0.84
VTA1-201ENST00000367621 APOL1O14791 398 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 COCHO43405 550 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 GLUD1P00367 558 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 OAS1P00973 400 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 ITGAVP06756 1048 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 C8AP07357 584 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 TUBBP07437 444 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 TGM2P21980 687 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 HOXC13P31276 330 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 CCR1P32246 355 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 CARSP49589 748 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 TUBP50607 506 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 DRG2P55039 364 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 MLLT6P55198 1093 aaPredicted RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 TBX4P57082 545 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 NRG1Q02297 640 aaPredicted RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 GBE1Q04446 702 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 PLD1Q13393 1074 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 GPM6BQ13491 265 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 BRD3Q15059 726 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 QPCTQ16769 361 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 ARL13BQ3SXY8 428 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 ODF2Q5BJF6 829 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 C10orf120Q5SQS8 335 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 PIK3R6Q5UE93 754 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 KLHDC10Q6PID8 442 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 C1orf228Q6PIY5 440 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 GAREM2Q75VX8 874 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
VTA1-201ENST00000367621 PRUNE1Q86TP1 453 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 DDX42Q86XP3 938 aaKnown RBP eCLIP9.81□□□□□ -0.84
VTA1-201ENST00000367621 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 ALLCQ8N6M5 410 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 PDZD8Q8NEN9 1154 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 WBP2Q969T9 261 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 ZNF512Q96ME7 567 aaPredicted RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 RUNDC3BQ96NL0 473 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 OLFM3Q96PB7 478 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 KLC2Q9H0B6 622 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 RNF38Q9H0F5 515 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 PRDM16Q9HAZ2 1276 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 USP29Q9HBJ7 922 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 OLA1Q9NTK5 396 aaKnown RBP9.81□□□□□ -0.84
VTA1-201ENST00000367621 TMEM51Q9NW97 253 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 GRHL1Q9NZI5 618 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 TRPM5Q9NZQ8 1165 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 OR12D3Q9UGF7 316 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 ASB3Q9Y575 518 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 HS3ST4Q9Y661 456 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 PLXNA3P51805 1871 aa9.81□□□□□ -0.84
VTA1-201ENST00000367621 RANBP2P49792 3224 aaKnown RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 LAMA2P24043 3122 aaKnown RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 CHD7Q9P2D1 2997 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 SLC12A8A0AV02 714 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 C2orf78A6NCI8 922 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 H3BRJ5 948 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 J3QL48 77 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 EEF2KO00418 725 aaKnown RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 DAPK3O43293 454 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 CREB3O43889 395 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 GREM1O60565 184 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 LRIG2O94898 1065 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 CSPG5O95196 566 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 ECEL1O95672 775 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 OLFM2O95897 454 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 EPCAMP16422 314 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 ERCC2P18074 760 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 BMP8BP34820 402 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 CA8P35219 290 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 PPP3CCP48454 512 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 KCNQ1P51787 676 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 GDF10P55107 478 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 RING1Q06587 406 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 PTK6Q13882 451 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
VTA1-201ENST00000367621 PAFAH1B3Q15102 231 aaKnown RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
VTA1-201ENST00000367621 HECTD3Q5T447 861 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms