RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 GABRDO14764 452 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 SOAT2O75908 522 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PROSCO94903 275 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 TUBBP07437 444 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CPB1P15086 417 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CTNNA1P35221 906 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PEX5P50542 639 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CDR1P51861 262 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 DGKEP52429 567 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 EPHB3P54753 998 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 SCAPQ12770 1279 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PLD1Q13393 1074 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 ORC1Q13415 861 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 GPR158Q5T848 1215 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 ZNF280DQ6N043 979 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CHCHD4Q8N4Q1 142 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 SENP8Q96LD8 212 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 THG1LQ9NWX6 298 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 EVLQ9UI08 416 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CYTH4Q9UIA0 394 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 PCDHA3Q9Y5H8 950 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CABIN1Q9Y6J0 2220 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 UPK3BL1B0FP48 263 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 UPK3BL2E5RIL1 263 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 PGRMC1O00264 195 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 SPOPO43791 374 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 CEP104O60308 925 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 FGF19O95750 216 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 WEE1P30291 646 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 MAPK8P45983 427 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 LHX1P48742 406 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 DNA2P51530 1060 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 SNX16P57768 344 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 PDCLQ13371 301 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 DMC1Q14565 340 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 GOLGA7BQ2TAP0 167 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 USP39Q53GS9 565 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 ARHGAP15Q53QZ3 475 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 C2CD6Q53TS8 623 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 TRIM61Q5EBN2 209 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 RAB44Q7Z6P3 723 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 XYLT1Q86Y38 959 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 C12orf29Q8N999 325 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 NOA1Q8NC60 698 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 RPLP0P6Q8NHW5 317 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 IPO4Q8TEX9 1081 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 FNIP1Q8TF40 1166 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 PIGKQ92643 395 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 MS4A14Q96JA4 679 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 SUSD3Q96L08 255 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 NUSAP1Q9BXS6 441 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 CYLDQ9NQC7 956 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 GKN1Q9NS71 199 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 HESX1Q9UBX0 185 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 SLC27A5Q9Y2P5 690 aa11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 TIMM13Q9Y5L4 95 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-202ENST00000366216 TP53BP1Q12888 1972 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 CYP11A1P05108 521 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 H2AFXP16104 143 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ENGP17813 658 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DRD1P21728 446 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 BCKDHBP21953 392 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 LMO2P25791 158 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 RPL34P49207 117 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DHPSP49366 369 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 RWDD2BP57060 319 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 C2orf54Q08AI8 447 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DUSP4Q13115 394 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 SEMA3BQ13214 749 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 RUNX3Q13761 415 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 PIGHQ14442 188 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 ZNF423Q2M1K9 1284 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 GLE1Q53GS7 698 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 CCDC70Q6NSX1 233 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DCUN1D2Q6PH85 259 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
CSNK1E-202ENST00000366216 PHLDB2Q86SQ0 1253 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms