RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 PPP2R5DQ14738 602 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 BOLA3Q53S33 107 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ERMARDQ5T6L9 678 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCDC181Q5TID7 509 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 NUGGCQ68CJ6 796 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 GAREM2Q75VX8 874 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TMEM150AQ86TG1 271 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 MIB1Q86YT6 1006 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 MAP7D3Q8IWC1 876 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ARFGAP1Q8N6T3 406 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 KCTD6Q8NC69 237 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 EXD1Q8NHP7 514 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TTC8Q8TAM2 541 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ALG3Q92685 438 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 FGF13Q92913 245 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PLD4Q96BZ4 506 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TCEAL4Q96EI5 215 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PBKQ96KB5 322 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZSWIM3Q96MP5 696 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 PEBP4Q96S96 227 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 NAP1L3Q99457 506 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SNRNP25Q9BV90 132 aaKnown RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 TUBB2BQ9BVA1 445 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 LRRC3Q9BY71 257 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 ADAM33Q9BZ11 813 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLITRK6Q9H5Y7 841 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 WDCPQ9H6R7 721 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 IL21Q9HBE4 155 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 KLHL11Q9NVR0 708 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 POLR3BQ9NW08 1133 aaPredicted RBP7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 C2orf42Q9NWW7 574 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 CALCOCO1Q9P1Z2 691 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SFMBT1Q9UHJ3 866 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLC12A6Q9UHW9 1150 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 NUDT5Q9UKK9 219 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 AP4E1Q9UPM8 1137 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 F5P12259 2224 aa7.02□□□□□ -1.29
RNU1-55P-201ENST00000365510 FANCMQ8IYD8 2048 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 KANSL1LA0AUZ9 987 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 C2orf78A6NCI8 922 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 PGRMC1O00264 195 aaKnown RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CEP104O60308 925 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 GDF9O60383 454 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZRANB2O95218 330 aaKnown RBP eCLIP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 OLFM2O95897 454 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TBX18O95935 607 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 MOCS2O96007 188 aaPredicted RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 IGLV3-27P01718 113 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 RARAP10276 462 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 HDCP19113 662 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TARSP26639 723 aaKnown RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CXCR5P32302 372 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 AVPR1AP37288 418 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 HARS2P49590 506 aaKnown RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 PEX5P50542 639 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZNF135P52742 658 aaPredicted RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CDH6P55285 790 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 STARD6P59095 220 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 COPS2P61201 443 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 RING1Q06587 406 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 PDK2Q15119 407 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TEAD2Q15562 447 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCDC6Q16204 474 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 WHAMMP3Q1A5X7 153 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZC3H12AQ5D1E8 599 aaKnown RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 KCNT1Q5JUK3 1230 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 GPR158Q5T848 1215 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 DCAF12L1Q5VU92 463 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TXNDC8Q6A555 127 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CYP4V2Q6ZWL3 525 aaPredicted RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 VSIG1Q86XK7 387 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 DDX42Q86XP3 938 aaKnown RBP eCLIP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 UNC45BQ8IWX7 931 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 RCOR2Q8IZ40 523 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCDC185Q8N715 623 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 MAB21L3Q8N8X9 362 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ATP6V0D2Q8N8Y2 350 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 PJA1Q8NG27 643 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 SHKBP1Q8TBC3 707 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 RUBCNQ92622 972 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 BTN2A3PQ96KV6 586 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 HAPLN3Q96S86 360 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 EPAS1Q99814 870 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZNF670Q9BS34 389 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 CALN1Q9BXU9 219 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TKTL2Q9H0I9 626 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 DHX35Q9H5Z1 703 aaKnown RBP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 TASP1Q9H6P5 420 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 HEBP1Q9NRV9 189 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 ARHGEF38Q9NXL2 777 aa7.01□□□□□ -1.29
RNU1-55P-201ENST00000365510 DLL3Q9NYJ7 618 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms