RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PSG1P11464 419 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 TFEBP19484 476 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC12A2P55011 1212 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 FOXL2P58012 376 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 RNASELQ05823 741 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 PFKFB4Q16877 469 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SLC39A5Q6ZMH5 540 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 COLCA1Q6ZS62 124 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 NOL8Q76FK4 1167 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 B4GALNT4Q76KP1 1039 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 NRSN1Q8IZ57 195 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SRFBP1Q8NEF9 429 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 WDR60Q8WVS4 1066 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 KAT2BQ92831 832 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 EME1Q96AY2 570 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 MSI2Q96DH6 328 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAR2Q96K12 515 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 PIMREGQ9BSJ6 248 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 WDR12Q9GZL7 423 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 OSBPL5Q9H0X9 879 aaPredicted RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SEPSECSQ9HD40 501 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 POT1Q9NUX5 634 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 IPO11Q9UI26 975 aaKnown RBP5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SPATA31A5Q5VU36 1347 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 SPATA31A7Q8IWB4 1347 aa5.13□□□□□ -1.59
RNU4-28P-201ENST00000364739 TRBV5-3A0A0A0MS03 114 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 H3BNX3 289 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ALDOCP09972 364 aaKnown RBP5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 PDIA3P30101 505 aaKnown RBP5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 CCT4P50991 539 aaKnown RBP5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 LINC00205P59089 165 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 TAS2R50P59544 299 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 GALNT1Q10472 559 aaPredicted RBP5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 LAMB3Q13751 1172 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 LEXMQ3ZCV2 418 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ZNF569Q5MCW4 686 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 NUGGCQ68CJ6 796 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 TOGARAM2Q6ZUX3 1019 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ADGRF3Q8IZF5 1079 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ARFGAP1Q8N6T3 406 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ATG16L2Q8NAA4 619 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 VPS37AQ8NEZ2 397 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 BCAS4Q8TDM0 211 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 VCPIP1Q96JH7 1222 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 TRMOQ9BU70 441 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 CRB3Q9BUF7 120 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 ZBTB1Q9Y2K1 713 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 LRCH1Q9Y2L9 728 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 SQORQ9Y6N5 450 aa5.12□□□□□ -1.59
RNU4-28P-201ENST00000364739 GOLGA6L3A6NEY3 463 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 USP12O75317 370 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 NDUFB8O95169 186 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 FGF2P09038 288 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 TNFRSF1BP20333 461 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 GRK5P34947 590 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 B4GALNT1Q00973 533 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 SF3A3Q12874 501 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 PTK2BQ14289 1009 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 GLE1Q53GS7 698 aaKnown RBP5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 C1orf228Q6PIY5 440 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 GATAD2AQ86YP4 633 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 MMP21Q8N119 569 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 EXD3Q8N9H8 876 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM71BQ8TC56 605 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 IP6K1Q92551 441 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 KAT2AQ92830 837 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 TUBB6Q9BUF5 446 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 TP63Q9H3D4 680 aaPredicted RBP5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 PAPOLBQ9NRJ5 636 aaKnown RBP5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 ZBTB40Q9NUA8 1239 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 FBXO4Q9UKT5 387 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 CNTN6Q9UQ52 1028 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 LMTK3Q96Q04 1460 aa5.11□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3DA0A087WVF3 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3IA0A087WXS9 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3EA0A087X179 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3KA0A087X1G2 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TMEM272A0A1B0GTI8 110 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 ABHD14A-ACY1A0A1B0GW23 586 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3BA6NDS4 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A18PA6NE21 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3FA6NER0 549 aaPredicted RBP5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A16PA6NEW6 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 AGAP5A6NIR3 686 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 A6NNC1 897 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A9PA6NNJ1 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A5PA8MXJ8 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3LB9A6J9 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 F8W810 466 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TRIM38O00635 465 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 WNT1P04628 370 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A15PP0C7V4 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 FAM90A14PP0C7W9 464 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 TBC1D3HP0C7X1 549 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 CHRNB1P11230 501 aa5.1□□□□□ -1.59
RNU4-28P-201ENST00000364739 CIITAP33076 1130 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms