RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TCF15Q12870 199 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 LONRF2Q1L5Z9 754 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 SLC13A5Q86YT5 568 aaPredicted RBP21.34■■□□□ 1.01
SHISA4-201ENST00000362011 FBXL6Q8N531 539 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 MAIP1Q8WWC4 291 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 ZFRQ96KR1 1074 aaKnown RBP21.34■■□□□ 1.01
SHISA4-201ENST00000362011 SLC46A2Q9BY10 475 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 MAGEB5Q9BZ81 275 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 SMPD4Q9NXE4 827 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 SMARCAL1Q9NZC9 954 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 RCOR3Q9P2K3 495 aaPredicted RBP21.34■■□□□ 1.01
SHISA4-201ENST00000362011 CPQQ9Y646 472 aa21.34■■□□□ 1.01
SHISA4-201ENST00000362011 HARS2P49590 506 aaKnown RBP21.33■■□□□ 1.01
SHISA4-201ENST00000362011 MMRN1Q13201 1228 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 ACBD5Q5T8D3 534 aaPredicted RBP21.33■■□□□ 1.01
SHISA4-201ENST00000362011 KAZNQ674X7 775 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 ANKS1BQ7Z6G8 1248 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 RFX6Q8HWS3 928 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 CEP112Q8N8E3 955 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 TSC1Q92574 1164 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 EPAS1Q99814 870 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 MAK16Q9BXY0 300 aaKnown RBP21.33■■□□□ 1.01
SHISA4-201ENST00000362011 SIK2Q9H0K1 926 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 SLITRK6Q9H5Y7 841 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 GKN1Q9NS71 199 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 EFR3BQ9Y2G0 817 aa21.33■■□□□ 1.01
SHISA4-201ENST00000362011 KIF26AQ9ULI4 1882 aaPredicted RBP21.33■■□□□ 1.01
SHISA4-201ENST00000362011 CREB3O43889 395 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 KRT10P13645 584 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 FSHRP23945 695 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 AVPR1AP37288 418 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 ITIH3Q06033 890 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 SEMA3BQ13214 749 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 LLGL1Q15334 1064 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 ANKRD20A8PQ5CZ79 823 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 CMTM8Q8IZV2 173 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 MNS1Q8NEH6 495 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 ITFG1Q8TB96 612 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 ING5Q8WYH8 240 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 FAF2Q96CS3 445 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 RNF157Q96PX1 679 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 CARD6Q9BX69 1037 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 HEMGNQ9BXL5 484 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 DCLK3Q9C098 648 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 CWC15Q9P013 229 aaKnown RBP21.32■■□□□ 1
SHISA4-201ENST00000362011 OR12D3Q9UGF7 316 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 XPO7Q9UIA9 1087 aaKnown RBP21.32■■□□□ 1
SHISA4-201ENST00000362011 SNX10Q9Y5X0 201 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 HS3ST4Q9Y661 456 aa21.32■■□□□ 1
SHISA4-201ENST00000362011 PDE2AO00408 941 aaPredicted RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 EEF2KO00418 725 aaKnown RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 ACSL4O60488 711 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 TJP3O95049 919 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 GOT1P17174 413 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 CORO1AP31146 461 aaKnown RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 HTR7P34969 479 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 SLC11A2P49281 568 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 TPI1P60174 286 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 NRG1Q02297 640 aaPredicted RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 TFDP2Q14188 446 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 PIK3R6Q5UE93 754 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 CES5AQ6NT32 575 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 ZNF572Q7Z3I7 529 aaPredicted RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 DDX42Q86XP3 938 aaKnown RBP eCLIP21.31■■□□□ 1
SHISA4-201ENST00000362011 SUGP1Q8IWZ8 645 aaKnown RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 AZIN2Q96A70 460 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 RPGRIP1Q96KN7 1286 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 C1orf74Q96LT6 269 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 ADAM7Q9H2U9 754 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 LSM7Q9UK45 103 aaKnown RBP21.31■■□□□ 1
SHISA4-201ENST00000362011 ARHGAP26Q9UNA1 814 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 USP34Q70CQ2 3546 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 CHD5Q8TDI0 1954 aa21.31■■□□□ 1
SHISA4-201ENST00000362011 FAM72CH0Y354 149 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 LATS1O95835 1130 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 IL4RP24394 825 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 GGCXP38435 758 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 HCAR3P49019 387 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 MLLT6P55198 1093 aaPredicted RBP21.3■■□□□ 1
SHISA4-201ENST00000362011 MS4A13Q5J8X5 152 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 FAM72AQ5TYM5 149 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 FAM72DQ6L9T8 149 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 ADAT2Q7Z6V5 191 aaKnown RBP21.3■■□□□ 1
SHISA4-201ENST00000362011 FAM72BQ86X60 149 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 DENND1CQ8IV53 801 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 CSPG4P5Q96PW8 444 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 HERPUD2Q9BSE4 406 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 PRDM16Q9HAZ2 1276 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 SH3BP1Q9Y3L3 701 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 MYOFQ9NZM1 2061 aa21.3■■□□□ 1
SHISA4-201ENST00000362011 NYNRINQ9P2P1 1898 aaKnown RBP21.3■■□□□ 1
SHISA4-201ENST00000362011 DAPK3O43293 454 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 LRIG2O94898 1065 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 KLF1Q13351 362 aaPredicted RBP21.29■■□□□ 1
SHISA4-201ENST00000362011 ATAT1Q5SQI0 421 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 MANEALQ5VSG8 457 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 RAP1GAP2Q684P5 730 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 BBS12Q6ZW61 710 aa21.29■■□□□ 1
SHISA4-201ENST00000362011 CHSY1Q86X52 802 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms