RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DTLQ9NZJ0 730 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 ZBTB14O43829 449 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 L1CAMP32004 1257 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 CRHR1P34998 444 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 IDH3AP50213 366 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 RAB27AP51159 221 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 CUL3Q13618 768 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 MXD4Q14582 209 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 RABGAP1LQ5R372 815 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 ARMC3Q5W041 872 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 TAPT1Q6NXT6 567 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 PAOXQ6QHF9 649 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 NET1Q7Z628 596 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 AHCYL1O43865 530 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 MFSD11O43934 449 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 PGM3O95394 542 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 VDRP11473 427 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 IGFBP6P24592 240 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 SERPINB6P35237 376 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 GK3PQ14409 553 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 STILQ15468 1287 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 SLC9A4Q6AI14 798 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 PIWIL2Q8TC59 973 aaKnown RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 TFB1MQ8WVM0 346 aaKnown RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 ZMAT2Q96NC0 199 aaKnown RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 GBP5Q96PP8 586 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 MMADHCQ9H3L0 296 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 HESX1Q9UBX0 185 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 TUBGCP4Q9UGJ1 667 aa10.89□□□□□ -0.67
SMC3-201ENST00000361804 BARX2Q9UMQ3 279 aaPredicted RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 RPL26L1Q9UNX3 145 aaKnown RBP10.89□□□□□ -0.67
SMC3-201ENST00000361804 NLRC5Q86WI3 1866 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 MAGEA13PA6NCF6 341 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 A6NJR5 290 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SERPINA6P08185 405 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 LMO2P25791 158 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 PSMB4P28070 264 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 GRM1Q13255 1194 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 TMEM132DQ14C87 1099 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SLC9B1Q4ZJI4 515 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 PACS1Q6VY07 963 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 ZNF781Q8N8C0 355 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 CCNYQ8ND76 341 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 TUBB6Q9BUF5 446 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 TRIM4Q9C037 500 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 WDR55Q9H6Y2 383 aaPredicted RBP10.88□□□□□ -0.67
SMC3-201ENST00000361804 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 CACNG4Q9UBN1 327 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 ANGPTL2Q9UKU9 493 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SOX13Q9UN79 622 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 AP4E1Q9UPM8 1137 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 PCDHA11Q9Y5I1 949 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 VCANP13611 3396 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 INSRRP14616 1297 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 ABCD1P33897 745 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 AP2B1P63010 937 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SURF1Q15526 300 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 RASIP1Q5U651 963 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 CSPG4P5Q96PW8 444 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SH3GL3Q99963 347 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 FRMD8P1Q9BZ68 369 aaPredicted RBP10.88□□□□□ -0.67
SMC3-201ENST00000361804 THAP1Q9NVV9 213 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 KCNG1Q9UIX4 513 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 ZNF180Q9UJW8 692 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 A8MXQ7 604 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 CREB3O43889 395 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 PLIN3O60664 434 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 OPHN1O60890 802 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 IGHA2P01877 340 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 SERPINB5P36952 375 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 MAGEA3P43357 314 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 TRIP10Q15642 601 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 CMPK2Q5EBM0 449 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 DCAF15Q66K64 600 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 NCBP2-AS2Q69YL0 99 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 HEATR6Q6AI08 1181 aaKnown RBP10.88□□□□□ -0.67
SMC3-201ENST00000361804 FBXL19Q6PCT2 694 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 COLGALT1Q8NBJ5 622 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 ARNTL2Q8WYA1 636 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 FCRL3Q96P31 734 aaPredicted RBP10.88□□□□□ -0.67
SMC3-201ENST00000361804 GCNAQ96QF7 691 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 TBCBQ99426 244 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 NT5C1AQ9BXI3 368 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 S100A14Q9HCY8 104 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
SMC3-201ENST00000361804 BCLAF3A2AJT9 711 aaKnown RBP10.87□□□□□ -0.67
SMC3-201ENST00000361804 CLGNO14967 610 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 SNUPNO95149 360 aaKnown RBP10.87□□□□□ -0.67
SMC3-201ENST00000361804 LTFP02788 710 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 GSTT1P30711 240 aa10.87□□□□□ -0.67
SMC3-201ENST00000361804 TRMT5Q32P41 509 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms