RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PDCD10Q9BUL8 212 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ARMC7Q9H6L4 198 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 COQ6Q9Y2Z9 468 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 MTRF1O75570 445 aaKnown RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 WARSP23381 471 aaKnown RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 RPL21P46778 160 aaKnown RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 SOX10P56693 466 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ABATP80404 500 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 RHAGQ02094 409 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 NFIXQ14938 502 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 TOMM20Q15388 145 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ZIK1Q3SY52 487 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 MFSD7Q6UXD7 560 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 DSG4Q86SJ6 1040 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ZBTB46Q86UZ6 589 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 DHRSXQ8N5I4 330 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 LRRN4CLQ8ND94 238 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 BBS4Q96RK4 519 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 EMILIN2Q9BXX0 1053 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 PROCP04070 461 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 STAG3L1P0CL83 205 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 PGBD2Q6P3X8 592 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CYP20A1Q6UW02 462 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 PCDH20Q8N6Y1 951 aaKnown RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 BPIFB6Q8NFQ5 453 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 BCLAF3A2AJT9 711 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 SSNA1O43805 119 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 GHRP10912 638 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF276Q8N554 614 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 C15orf41Q9Y2V0 281 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 S100A9P06702 114 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 CKMP06732 381 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 FGRP09769 529 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 CYP2A7P20853 494 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 FMO4P31512 558 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 LGALS3BPQ08380 585 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 PACS2Q86VP3 889 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 FAM126BQ8IXS8 530 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 MAGEE2Q8TD90 523 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 NUAK2Q9H093 628 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ATXN3LQ9H3M9 355 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 WDR41Q9HAD4 459 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ABCB10Q9NRK6 738 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 MRPS7Q9Y2R9 242 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 KCNQ2O43526 872 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 SERPINE1P05121 402 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 CD151P48509 253 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 EIF2B5Q13144 721 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ERMARDQ5T6L9 678 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 DOK6Q6PKX4 331 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 IKBIPQ70UQ0 350 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 RIT2Q99578 217 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 COLEC11Q9BWP8 271 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 RBM22Q9NW64 420 aaKnown RBP eCLIP16.36■□□□□ 0.211e-6■■□□□ 11.6
COL18A1-203ENST00000359759 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 KHDRBS3O75525 346 aaKnown RBP16.36■□□□□ 0.21
COL18A1-203ENST00000359759 OLFML1Q6UWY5 402 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 MILR1Q7Z6M3 343 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 EFCAB3Q8N7B9 438 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 SLC5A5Q92911 643 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 SPACA7Q96KW9 195 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 DCLK3Q9C098 648 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 TBC1D13Q9NVG8 400 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 NDOR1Q9UHB4 597 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 MUTP22033 750 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 FAM20CQ8IXL6 584 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 S100A13Q99584 98 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
COL18A1-203ENST00000359759 TP73O15350 636 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 SYNCRIPO60506 623 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 H2AFXP16104 143 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 BCAT1P54687 386 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 MYL6P60660 151 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TGM3Q08188 693 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 NR1D2Q14995 579 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TAB1Q15750 504 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 SETD9Q8NE22 299 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 APOPT1Q96IL0 206 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM138Q9NPI0 162 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TIMM13Q9Y5L4 95 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CCDC130P13994 396 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TKTL1P51854 596 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM132BQ14DG7 1078 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CTXN3Q4LDR2 81 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 C16orf46Q6P387 395 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 MPZL3Q6UWV2 235 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM176AQ96HP8 235 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 C9orf16Q9BUW7 83 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms