RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 KCTD6Q8NC69 237 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 EBNA1BP2Q99848 306 aaKnown RBP10.95□□□□□ -0.66
CAPN3-205ENST00000357568 KIFC3Q9BVG8 833 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 APOL6Q9BWW8 343 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 SLC13A1Q9BZW2 595 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 SMYD2Q9NRG4 433 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 RNF186Q9NXI6 227 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 RBAKQ9NYW8 714 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-205ENST00000357568 PCDHA11Q9Y5I1 949 aa10.95□□□□□ -0.66
CAPN3-205ENST00000357568 PRSS51A0A1B0GVH4 220 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 HMX2A2RU54 273 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 VWA5AO00534 786 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TOM1L1O75674 476 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ATG7O95352 703 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 CSH1P0DML2 217 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 CSH2P0DML3 217 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 THRAP10827 490 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TMED1Q13445 227 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 RFTN1Q14699 578 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 UNC5AQ6ZN44 842 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 MAVSQ7Z434 540 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 HPS6Q86YV9 775 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 WDTC1Q8N5D0 677 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 HM13Q8TCT9 377 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ATP6V0A1Q93050 837 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ATG4CQ96DT6 458 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 VPS50Q96JG6 964 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 SORT1Q99523 831 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 MRPL1Q9BYD6 325 aaKnown RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ZNF395Q9H8N7 513 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 HOMER2Q9NSB8 354 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 FBXO28Q9NVF7 368 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 MOCS1Q9NZB8 636 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 SAE1Q9UBE0 346 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 CTDP1Q9Y5B0 961 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 CNTNAP2Q9UHC6 1331 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 MED7O43513 233 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TRUB2O95900 331 aaKnown RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 MRPS9P82933 396 aaKnown RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 PTPRJQ12913 1337 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 KLF10Q13118 480 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 FAM110CQ1W6H9 321 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 RWDD4Q6NW29 188 aaKnown RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 PACS1Q6VY07 963 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 FRMD7Q6ZUT3 714 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 SHCBP1Q8NEM2 672 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ELMO3Q96BJ8 720 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 ACSF2Q96CM8 615 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 NIF3L1Q9GZT8 377 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 TUBA8Q9NY65 449 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 EMCNQ9ULC0 261 aa10.94□□□□□ -0.66
CAPN3-205ENST00000357568 PAIP2BQ9ULR5 123 aaKnown RBP10.94□□□□□ -0.66
CAPN3-205ENST00000357568 CCDC160A6NGH7 325 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CNMDO75829 334 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 STBD1O95210 358 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 HNRNPCP07910 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 ABCE1P61221 599 aaKnown RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CRHR2Q13324 411 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 EPGNQ6UW88 154 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 WDR49Q8IV35 697 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 POU5F2Q8N7G0 328 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 TOP1MTQ969P6 601 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 DNAJC1Q96KC8 554 aaKnown RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 RAB6BQ9NRW1 208 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 PCDHB12Q9Y5F1 795 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 TRIM64CA6NLI5 447 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 ITM2AO43736 263 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CLASP2O75122 1294 aaKnown RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 SLC25A27O95847 323 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CCNE2O96020 404 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CYP2C8P10632 490 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 MLNP12872 115 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 ZFXP17010 805 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 GLDCP23378 1020 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 PSMD7P51665 324 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CCNA1P78396 465 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CBX3Q13185 183 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 TRPC3Q13507 836 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 PCLAFQ15004 111 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 PDK2Q15119 407 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CCDC153Q494R4 210 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 MFSD4BQ5TF39 518 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 KLHL35Q6PF15 583 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 RIOX2Q8IUF8 465 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CHERPQ8IWX8 916 aaKnown RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 CPSF7Q8N684 471 aaKnown RBP10.93□□□□□ -0.66
CAPN3-205ENST00000357568 IL31RAQ8NI17 732 aa10.93□□□□□ -0.66
CAPN3-205ENST00000357568 RP9Q8TA86 221 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms